Gene : Glyma.02G302000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  3020
Name:  ? Glyma.02G302000 Secondary Identifier:  ? PAC:30507013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G302000 0.5kb upstream 0.5kb upstream 6803 true Chr02: 47759297-47766099 Glycine max
Glyma.02G302000 0.5kb upstream 0.5kb upstream 500 false Chr02: 47759297-47759796 Glycine max
Glyma.02G302000 0.5kb downstream 0.5kb downstream 6803 true Chr02: 47759797-47766599 Glycine max
Glyma.02G302000 0.5kb downstream 0.5kb downstream 500 false Chr02: 47766100-47766599 Glycine max
Glyma.02G302000 1.0kb upstream 1.0kb upstream 7303 true Chr02: 47758797-47766099 Glycine max
Glyma.02G302000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47758797-47759796 Glycine max
Glyma.02G302000 1.0kb downstream 1.0kb downstream 7303 true Chr02: 47759797-47767099 Glycine max
Glyma.02G302000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47766100-47767099 Glycine max
Glyma.02G302000 2.0kb upstream 2.0kb upstream 8303 true Chr02: 47757797-47766099 Glycine max
Glyma.02G302000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47757797-47759796 Glycine max
Glyma.02G302000 2.0kb downstream 2.0kb downstream 8303 true Chr02: 47759797-47768099 Glycine max
Glyma.02G302000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47766100-47768099 Glycine max
Glyma.02G302000 5.0kb upstream 5.0kb upstream 11303 true Chr02: 47754797-47766099 Glycine max
Glyma.02G302000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47754797-47759796 Glycine max
Glyma.02G302000 5.0kb downstream 5.0kb downstream 11303 true Chr02: 47759797-47771099 Glycine max
Glyma.02G302000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47766100-47771099 Glycine max
Glyma.02G302000 10.0kb upstream 10.0kb upstream 16303 true Chr02: 47749797-47766099 Glycine max
Glyma.02G302000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47749797-47759796 Glycine max
Glyma.02G302000 10.0kb downstream 10.0kb downstream 16303 true Chr02: 47759797-47776099 Glycine max
Glyma.02G302000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47766100-47776099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122302951 5265 Fabidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2735 0.0 41.9716    
cufflinks 11.9217 0.0 40.8211    
cufflinks 6.3015 0.0 22.2553   Low
cufflinks 13.4029 0.0 46.0804    
cufflinks 17.4059 0.0 61.5281   High
cufflinks 9.30646 0.0 31.8486    
cufflinks 17.938 0.0 63.4928   High
cufflinks 12.9425 0.0 44.4926    
cufflinks 12.7828 0.0 43.9204    
cufflinks 3.406        
cufflinks 0.945       Low
cufflinks 2.962        
cufflinks 4.598       High
cufflinks 5.926       High
cufflinks 1.916        
cufflinks 2.873        
cufflinks 1.445       Low
cufflinks 3.459        
cufflinks 4.734       High
cufflinks 2.658        
cufflinks 1.7        
cufflinks 2.929        
cufflinks 3.195        
cufflinks 1.333       Low
cufflinks 2.551        
cufflinks 1.838        

0 Strain