Gene : Glyma.02G299100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2991
Name:  ? Glyma.02G299100 Secondary Identifier:  ? PAC:30507810
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G299100 0.5kb upstream 0.5kb upstream 2198 true Chr02: 47615800-47617997 Glycine max
Glyma.02G299100 0.5kb upstream 0.5kb upstream 500 false Chr02: 47617498-47617997 Glycine max
Glyma.02G299100 0.5kb downstream 0.5kb downstream 2198 true Chr02: 47615300-47617497 Glycine max
Glyma.02G299100 0.5kb downstream 0.5kb downstream 500 false Chr02: 47615300-47615799 Glycine max
Glyma.02G299100 1.0kb upstream 1.0kb upstream 2698 true Chr02: 47615800-47618497 Glycine max
Glyma.02G299100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47617498-47618497 Glycine max
Glyma.02G299100 1.0kb downstream 1.0kb downstream 2698 true Chr02: 47614800-47617497 Glycine max
Glyma.02G299100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47614800-47615799 Glycine max
Glyma.02G299100 2.0kb upstream 2.0kb upstream 3698 true Chr02: 47615800-47619497 Glycine max
Glyma.02G299100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47617498-47619497 Glycine max
Glyma.02G299100 2.0kb downstream 2.0kb downstream 3698 true Chr02: 47613800-47617497 Glycine max
Glyma.02G299100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47613800-47615799 Glycine max
Glyma.02G299100 5.0kb upstream 5.0kb upstream 6698 true Chr02: 47615800-47622497 Glycine max
Glyma.02G299100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47617498-47622497 Glycine max
Glyma.02G299100 5.0kb downstream 5.0kb downstream 6698 true Chr02: 47610800-47617497 Glycine max
Glyma.02G299100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47610800-47615799 Glycine max
Glyma.02G299100 10.0kb upstream 10.0kb upstream 11698 true Chr02: 47615800-47627497 Glycine max
Glyma.02G299100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47617498-47627497 Glycine max
Glyma.02G299100 10.0kb downstream 10.0kb downstream 11698 true Chr02: 47605800-47617497 Glycine max
Glyma.02G299100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47605800-47615799 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297124 5265 Fabidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4383 0.0 46.532   High
cufflinks 8.12245 0.0 22.4427    
cufflinks 7.57822 0.0 21.0227    
cufflinks 5.06262 0.0 14.6803   Low
cufflinks 8.85516 0.0 24.2648    
cufflinks 10.2582 0.0 27.8419    
cufflinks 9.12714 0.0 24.9237    
cufflinks 7.49021 0.0 20.7791    
cufflinks 11.2044 0.0 30.2668    
cufflinks 2.941       Low
cufflinks 5.852     High  
cufflinks 6.959        
cufflinks 12.377     High  
cufflinks 7.486     High  
cufflinks 5.247     High Low
cufflinks 8.324     High  
cufflinks 8.858     High  
cufflinks 9.443     High  
cufflinks 6.028        
cufflinks 21.262     High High
cufflinks 7.32     High  
cufflinks 15.747     High High
cufflinks 11.3     High  
cufflinks 12.752     High  
cufflinks 11.084     High  
cufflinks 6.512     High  

0 Strain