Gene : Glyma.02G295000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13773:SF10 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Genomic Order:  2950
Name:  ? Glyma.02G295000 Secondary Identifier:  ? PAC:30507452
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1319 Glycine max pathologic  
Gmax PWY4FS-7 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G295000 0.5kb upstream 0.5kb upstream 6377 true Chr02: 47306160-47312536 Glycine max
Glyma.02G295000 0.5kb upstream 0.5kb upstream 500 false Chr02: 47312037-47312536 Glycine max
Glyma.02G295000 0.5kb downstream 0.5kb downstream 6377 true Chr02: 47305660-47312036 Glycine max
Glyma.02G295000 0.5kb downstream 0.5kb downstream 500 false Chr02: 47305660-47306159 Glycine max
Glyma.02G295000 1.0kb upstream 1.0kb upstream 6877 true Chr02: 47306160-47313036 Glycine max
Glyma.02G295000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47312037-47313036 Glycine max
Glyma.02G295000 1.0kb downstream 1.0kb downstream 6877 true Chr02: 47305160-47312036 Glycine max
Glyma.02G295000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47305160-47306159 Glycine max
Glyma.02G295000 2.0kb upstream 2.0kb upstream 7877 true Chr02: 47306160-47314036 Glycine max
Glyma.02G295000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47312037-47314036 Glycine max
Glyma.02G295000 2.0kb downstream 2.0kb downstream 7877 true Chr02: 47304160-47312036 Glycine max
Glyma.02G295000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47304160-47306159 Glycine max
Glyma.02G295000 5.0kb upstream 5.0kb upstream 10877 true Chr02: 47306160-47317036 Glycine max
Glyma.02G295000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47312037-47317036 Glycine max
Glyma.02G295000 5.0kb downstream 5.0kb downstream 10877 true Chr02: 47301160-47312036 Glycine max
Glyma.02G295000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47301160-47306159 Glycine max
Glyma.02G295000 10.0kb upstream 10.0kb upstream 15877 true Chr02: 47306160-47322036 Glycine max
Glyma.02G295000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47312037-47322036 Glycine max
Glyma.02G295000 10.0kb downstream 10.0kb downstream 15877 true Chr02: 47296160-47312036 Glycine max
Glyma.02G295000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47296160-47306159 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296786 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0162125 0.0 0.0840816 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0973235 0.0 0.391179 Low  
cufflinks 0.0343582 0.0 0.149104 Low  
cufflinks 0.0555447 0.0 0.231901 Low  
cufflinks 0.0883052 0.0 0.35512 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.637355 0.0 3.98576   High
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.032     Low High
cufflinks 0.01     Low  
cufflinks 0.004     Low  
cufflinks 0.049     Low High
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.151       High
cufflinks 0.012     Low  
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.004     Low  

0 Strain