Gene : Glyma.02G001200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13109 - NEUROCHONDRIN Genomic Order:  12
Name:  ? Glyma.02G001200 Secondary Identifier:  ? PAC:30510123
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G001200 0.5kb upstream 0.5kb upstream 9357 true Chr02: 139835-149191 Glycine max
Glyma.02G001200 0.5kb upstream 0.5kb upstream 500 false Chr02: 139835-140334 Glycine max
Glyma.02G001200 0.5kb downstream 0.5kb downstream 9357 true Chr02: 140335-149691 Glycine max
Glyma.02G001200 0.5kb downstream 0.5kb downstream 500 false Chr02: 149192-149691 Glycine max
Glyma.02G001200 1.0kb upstream 1.0kb upstream 9857 true Chr02: 139335-149191 Glycine max
Glyma.02G001200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 139335-140334 Glycine max
Glyma.02G001200 1.0kb downstream 1.0kb downstream 9857 true Chr02: 140335-150191 Glycine max
Glyma.02G001200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 149192-150191 Glycine max
Glyma.02G001200 2.0kb upstream 2.0kb upstream 10857 true Chr02: 138335-149191 Glycine max
Glyma.02G001200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 138335-140334 Glycine max
Glyma.02G001200 2.0kb downstream 2.0kb downstream 10857 true Chr02: 140335-151191 Glycine max
Glyma.02G001200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 149192-151191 Glycine max
Glyma.02G001200 5.0kb upstream 5.0kb upstream 13857 true Chr02: 135335-149191 Glycine max
Glyma.02G001200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 135335-140334 Glycine max
Glyma.02G001200 5.0kb downstream 5.0kb downstream 13857 true Chr02: 140335-154191 Glycine max
Glyma.02G001200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 149192-154191 Glycine max
Glyma.02G001200 10.0kb upstream 10.0kb upstream 18857 true Chr02: 130335-149191 Glycine max
Glyma.02G001200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 130335-140334 Glycine max
Glyma.02G001200 10.0kb downstream 10.0kb downstream 18857 true Chr02: 140335-159191 Glycine max
Glyma.02G001200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 149192-159191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302613 5265 Fabidae View MSA
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15009 0.0 19.9071    
cufflinks 6.72751 0.0 25.161    
cufflinks 4.63629 0.0 15.7976   Low
cufflinks 5.0183 0.0 16.8582   Low
cufflinks 6.9525 0.0 25.9776    
cufflinks 6.27783 0.0 20.1724    
cufflinks 11.3561 0.0 34.1589   High
cufflinks 5.92436 0.0 22.7198    
cufflinks 8.94298 0.0 27.3641   High
cufflinks 0.637        
cufflinks 0.273       Low
cufflinks 0.533        
cufflinks 1.035       High
cufflinks 1.095       High
cufflinks 0.168       Low
cufflinks 0.495        
cufflinks 0.325        
cufflinks 0.48        
cufflinks 0.696        
cufflinks 0.469        
cufflinks 0.262       Low
cufflinks 0.522        
cufflinks 0.646        
cufflinks 0.532        
cufflinks 0.494        
cufflinks 0.382        

0 Strain