Gene : Glyma.02G000800 G. max Wm82.a2.v1

Defline:  (1 of 1) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92 Genomic Order:  8
Name:  ? Glyma.02G000800 Secondary Identifier:  ? PAC:30508051

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G000800 0.5kb upstream 0.5kb upstream 1915 true Chr02: 88742-90656 Glycine max
Glyma.02G000800 0.5kb upstream 0.5kb upstream 500 false Chr02: 88742-89241 Glycine max
Glyma.02G000800 0.5kb downstream 0.5kb downstream 1915 true Chr02: 89242-91156 Glycine max
Glyma.02G000800 0.5kb downstream 0.5kb downstream 500 false Chr02: 90657-91156 Glycine max
Glyma.02G000800 1.0kb upstream 1.0kb upstream 2415 true Chr02: 88242-90656 Glycine max
Glyma.02G000800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 88242-89241 Glycine max
Glyma.02G000800 1.0kb downstream 1.0kb downstream 2415 true Chr02: 89242-91656 Glycine max
Glyma.02G000800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 90657-91656 Glycine max
Glyma.02G000800 2.0kb upstream 2.0kb upstream 3415 true Chr02: 87242-90656 Glycine max
Glyma.02G000800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 87242-89241 Glycine max
Glyma.02G000800 2.0kb downstream 2.0kb downstream 3415 true Chr02: 89242-92656 Glycine max
Glyma.02G000800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 90657-92656 Glycine max
Glyma.02G000800 5.0kb upstream 5.0kb upstream 6415 true Chr02: 84242-90656 Glycine max
Glyma.02G000800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 84242-89241 Glycine max
Glyma.02G000800 5.0kb downstream 5.0kb downstream 6415 true Chr02: 89242-95656 Glycine max
Glyma.02G000800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 90657-95656 Glycine max
Glyma.02G000800 10.0kb upstream 10.0kb upstream 11415 true Chr02: 79242-90656 Glycine max
Glyma.02G000800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 79242-89241 Glycine max
Glyma.02G000800 10.0kb downstream 10.0kb downstream 11415 true Chr02: 89242-100656 Glycine max
Glyma.02G000800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 90657-100656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309676 5265 Fabidae View MSA
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98641 0.0 9.86686   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0469794 0.0 0.196661 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0808262 0.0 0.328345 Low  
cufflinks 0.353511 0.0 1.35422    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0374857 0.0 0.159759 Low  
cufflinks 3.496        
cufflinks 5.242        
cufflinks 0.871        
cufflinks 2.174        
cufflinks 0.06     Low Low
cufflinks 2.624        
cufflinks 0.267        
cufflinks 35.025     High High
cufflinks 0.536        
cufflinks 0.2        
cufflinks 0.074     Low Low
cufflinks 5.07        
cufflinks 0.188        
cufflinks 1.047        
cufflinks 4.924        
cufflinks 0.155       Low
cufflinks 13.012     High High

0 Strain