Gene : Glyma.19G027100 G. max Wm82.a2.v1
Defline:  (1 of 10) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  271
Name:  ? Glyma.19G027100 Secondary Identifier:  ? PAC:30515237
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3461 Glycine max pathologic  
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G027100 0.5kb upstream 0.5kb upstream 5137 true Chr19: 3352775-3357911 Glycine max
Glyma.19G027100 0.5kb upstream 0.5kb upstream 500 false Chr19: 3357412-3357911 Glycine max
Glyma.19G027100 0.5kb downstream 0.5kb downstream 5137 true Chr19: 3352275-3357411 Glycine max
Glyma.19G027100 0.5kb downstream 0.5kb downstream 500 false Chr19: 3352275-3352774 Glycine max
Glyma.19G027100 1.0kb upstream 1.0kb upstream 5637 true Chr19: 3352775-3358411 Glycine max
Glyma.19G027100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3357412-3358411 Glycine max
Glyma.19G027100 1.0kb downstream 1.0kb downstream 5637 true Chr19: 3351775-3357411 Glycine max
Glyma.19G027100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3351775-3352774 Glycine max
Glyma.19G027100 2.0kb upstream 2.0kb upstream 6637 true Chr19: 3352775-3359411 Glycine max
Glyma.19G027100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3357412-3359411 Glycine max
Glyma.19G027100 2.0kb downstream 2.0kb downstream 6637 true Chr19: 3350775-3357411 Glycine max
Glyma.19G027100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3350775-3352774 Glycine max
Glyma.19G027100 5.0kb upstream 5.0kb upstream 9637 true Chr19: 3352775-3362411 Glycine max
Glyma.19G027100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3357412-3362411 Glycine max
Glyma.19G027100 5.0kb downstream 5.0kb downstream 9637 true Chr19: 3347775-3357411 Glycine max
Glyma.19G027100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3347775-3352774 Glycine max
Glyma.19G027100 10.0kb upstream 10.0kb upstream 14637 true Chr19: 3352775-3367411 Glycine max
Glyma.19G027100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3357412-3367411 Glycine max
Glyma.19G027100 10.0kb downstream 10.0kb downstream 14637 true Chr19: 3342775-3357411 Glycine max
Glyma.19G027100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3342775-3352774 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122309735 5265 Fabidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.0733 0.0 105.33 High High
cufflinks 19.2526 0.0 51.5111    
cufflinks 13.1536 0.0 35.7499   Low
cufflinks 40.6739 0.0 109.961 High High
cufflinks 11.2193 0.0 30.9336   Low
cufflinks 42.5908 0.0 115.327 High High
cufflinks 22.2779 0.0 59.4878 High  
cufflinks 27.0909 0.0 72.3237 High  
cufflinks 13.1113 0.0 35.6724   Low
cufflinks 4.829        
cufflinks 1.808       Low
cufflinks 3.474        
cufflinks 6.705        
cufflinks 2.276       Low
cufflinks 1.11       Low
cufflinks 6.547        
cufflinks 4.181        
cufflinks 4.57        
cufflinks 7.064       High
cufflinks 4.793        
cufflinks 2.454        
cufflinks 7.421     High High
cufflinks 5.415        
cufflinks 4.891        
cufflinks 4.826        
cufflinks 4.333        

0 Strain