Gene : Glyma.19G027500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33349:SF1 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  275
Name:  ? Glyma.19G027500 Secondary Identifier:  ? PAC:30512192
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G027500 0.5kb upstream 0.5kb upstream 4138 true Chr19: 3440907-3445044 Glycine max
Glyma.19G027500 0.5kb upstream 0.5kb upstream 500 false Chr19: 3440907-3441406 Glycine max
Glyma.19G027500 0.5kb downstream 0.5kb downstream 4138 true Chr19: 3441407-3445544 Glycine max
Glyma.19G027500 0.5kb downstream 0.5kb downstream 500 false Chr19: 3445045-3445544 Glycine max
Glyma.19G027500 1.0kb upstream 1.0kb upstream 4638 true Chr19: 3440407-3445044 Glycine max
Glyma.19G027500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3440407-3441406 Glycine max
Glyma.19G027500 1.0kb downstream 1.0kb downstream 4638 true Chr19: 3441407-3446044 Glycine max
Glyma.19G027500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3445045-3446044 Glycine max
Glyma.19G027500 2.0kb upstream 2.0kb upstream 5638 true Chr19: 3439407-3445044 Glycine max
Glyma.19G027500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3439407-3441406 Glycine max
Glyma.19G027500 2.0kb downstream 2.0kb downstream 5638 true Chr19: 3441407-3447044 Glycine max
Glyma.19G027500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3445045-3447044 Glycine max
Glyma.19G027500 5.0kb upstream 5.0kb upstream 8638 true Chr19: 3436407-3445044 Glycine max
Glyma.19G027500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3436407-3441406 Glycine max
Glyma.19G027500 5.0kb downstream 5.0kb downstream 8638 true Chr19: 3441407-3450044 Glycine max
Glyma.19G027500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3445045-3450044 Glycine max
Glyma.19G027500 10.0kb upstream 10.0kb upstream 13638 true Chr19: 3431407-3445044 Glycine max
Glyma.19G027500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3431407-3441406 Glycine max
Glyma.19G027500 10.0kb downstream 10.0kb downstream 13638 true Chr19: 3441407-3455044 Glycine max
Glyma.19G027500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3445045-3455044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306349 5265 Fabidae View MSA
124071368 5270 Rosid View MSA
123747266 5271 Pentapetalae View MSA
122791700 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392851 0.0 2.38538   Low
cufflinks 2.21209 0.0 8.67583    
cufflinks 3.38049 0.0 12.0857    
cufflinks 1.99556 0.0 8.05612    
cufflinks 1.23683 0.0 5.87729    
cufflinks 10.9654 0.0 32.5588   High
cufflinks 3.07029 0.0 11.0338    
cufflinks 0.931558 0.0 4.74012    
cufflinks 2.85172 0.0 10.3825    
cufflinks 1.124        
cufflinks 0.772        
cufflinks 1.187       High
cufflinks 0.822        
cufflinks 0.502       Low
cufflinks 2.243       High
cufflinks 0.855        
cufflinks 0.456       Low
cufflinks 0.699        
cufflinks 1.128        
cufflinks 0.664        
cufflinks 0.848        
cufflinks 0.702        
cufflinks 0.887        
cufflinks 0.637        
cufflinks 0.69        
cufflinks 0.565        

0 Strain