Gene : Glyma.02G196900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Genomic Order:  1969
Name:  ? Glyma.02G196900 Secondary Identifier:  ? PAC:30510795
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G196900 0.5kb upstream 0.5kb upstream 3372 true Chr02: 37350433-37353804 Glycine max
Glyma.02G196900 0.5kb upstream 0.5kb upstream 500 false Chr02: 37353305-37353804 Glycine max
Glyma.02G196900 0.5kb downstream 0.5kb downstream 3372 true Chr02: 37349933-37353304 Glycine max
Glyma.02G196900 0.5kb downstream 0.5kb downstream 500 false Chr02: 37349933-37350432 Glycine max
Glyma.02G196900 1.0kb upstream 1.0kb upstream 3872 true Chr02: 37350433-37354304 Glycine max
Glyma.02G196900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37353305-37354304 Glycine max
Glyma.02G196900 1.0kb downstream 1.0kb downstream 3872 true Chr02: 37349433-37353304 Glycine max
Glyma.02G196900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37349433-37350432 Glycine max
Glyma.02G196900 2.0kb upstream 2.0kb upstream 4872 true Chr02: 37350433-37355304 Glycine max
Glyma.02G196900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37353305-37355304 Glycine max
Glyma.02G196900 2.0kb downstream 2.0kb downstream 4872 true Chr02: 37348433-37353304 Glycine max
Glyma.02G196900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37348433-37350432 Glycine max
Glyma.02G196900 5.0kb upstream 5.0kb upstream 7872 true Chr02: 37350433-37358304 Glycine max
Glyma.02G196900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37353305-37358304 Glycine max
Glyma.02G196900 5.0kb downstream 5.0kb downstream 7872 true Chr02: 37345433-37353304 Glycine max
Glyma.02G196900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37345433-37350432 Glycine max
Glyma.02G196900 10.0kb upstream 10.0kb upstream 12872 true Chr02: 37350433-37363304 Glycine max
Glyma.02G196900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37353305-37363304 Glycine max
Glyma.02G196900 10.0kb downstream 10.0kb downstream 12872 true Chr02: 37340433-37353304 Glycine max
Glyma.02G196900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37340433-37350432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312013 5265 Fabidae View MSA
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.0559 0.0 78.2012 High  
cufflinks 22.2838 0.0 87.8615 High  
cufflinks 11.4459 0.0 50.8051   Low
cufflinks 22.8797 0.0 93.1544 High  
cufflinks 31.018 0.0 121.573 High High
cufflinks 21.3667 0.0 77.4586    
cufflinks 27.6774 0.0 108.895 High  
cufflinks 30.3006 0.0 105.716 High  
cufflinks 24.0115 0.0 81.8573 High  
cufflinks 3.105        
cufflinks 1.429       Low
cufflinks 2.551        
cufflinks 5.981       High
cufflinks 7.73     High High
cufflinks 1.696        
cufflinks 2.053        
cufflinks 1.82        
cufflinks 2.74        
cufflinks 2.605        
cufflinks 1.484        
cufflinks 1.89        
cufflinks 1.642        
cufflinks 2.723        
cufflinks 1.412       Low
cufflinks 1.826        
cufflinks 2.19        

0 Strain