Gene : Glyma.02G202700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11387 - CYTOCHROME C OXIDASE POLYPEPTIDE VIB Genomic Order:  2027
Name:  ? Glyma.02G202700 Secondary Identifier:  ? PAC:30507041
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G202700 0.5kb upstream 0.5kb upstream 1750 true Chr02: 38778077-38779826 Glycine max
Glyma.02G202700 0.5kb upstream 0.5kb upstream 500 false Chr02: 38779327-38779826 Glycine max
Glyma.02G202700 0.5kb downstream 0.5kb downstream 1750 true Chr02: 38777577-38779326 Glycine max
Glyma.02G202700 0.5kb downstream 0.5kb downstream 500 false Chr02: 38777577-38778076 Glycine max
Glyma.02G202700 1.0kb upstream 1.0kb upstream 2250 true Chr02: 38778077-38780326 Glycine max
Glyma.02G202700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38779327-38780326 Glycine max
Glyma.02G202700 1.0kb downstream 1.0kb downstream 2250 true Chr02: 38777077-38779326 Glycine max
Glyma.02G202700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38777077-38778076 Glycine max
Glyma.02G202700 2.0kb upstream 2.0kb upstream 3250 true Chr02: 38778077-38781326 Glycine max
Glyma.02G202700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38779327-38781326 Glycine max
Glyma.02G202700 2.0kb downstream 2.0kb downstream 3250 true Chr02: 38776077-38779326 Glycine max
Glyma.02G202700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38776077-38778076 Glycine max
Glyma.02G202700 5.0kb upstream 5.0kb upstream 6250 true Chr02: 38778077-38784326 Glycine max
Glyma.02G202700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38779327-38784326 Glycine max
Glyma.02G202700 5.0kb downstream 5.0kb downstream 6250 true Chr02: 38773077-38779326 Glycine max
Glyma.02G202700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38773077-38778076 Glycine max
Glyma.02G202700 10.0kb upstream 10.0kb upstream 11250 true Chr02: 38778077-38789326 Glycine max
Glyma.02G202700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38779327-38789326 Glycine max
Glyma.02G202700 10.0kb downstream 10.0kb downstream 11250 true Chr02: 38768077-38779326 Glycine max
Glyma.02G202700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38768077-38778076 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304645 5265 Fabidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8859 0.0 88.8245 High  
cufflinks 25.8522 0.0 87.8857 High  
cufflinks 20.8467 0.0 75.3658 High Low
cufflinks 20.3815 0.0 71.2409 High Low
cufflinks 30.0956 0.0 103.718 High  
cufflinks 47.2767 0.0 146.855 High High
cufflinks 42.4474 0.0 142.65 High High
cufflinks 28.9019 0.0 99.7357 High  
cufflinks 32.1514 0.0 108.472 High  
cufflinks 7.211        
cufflinks 4.054       Low
cufflinks 6.072        
cufflinks 11.796     High High
cufflinks 12.664     High High
cufflinks 4.157       Low
cufflinks 7.449     High  
cufflinks 4.798       Low
cufflinks 7.022        
cufflinks 7.028        
cufflinks 6.228        
cufflinks 5.115        
cufflinks 7.144        
cufflinks 6.824        
cufflinks 5.344        
cufflinks 7.582     High  
cufflinks 5.845        

0 Strain