Gene : Glyma.02G202200 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2022
Name:  ? Glyma.02G202200 Secondary Identifier:  ? PAC:30507254
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G202200 0.5kb upstream 0.5kb upstream 887 true Chr02: 38721379-38722265 Glycine max
Glyma.02G202200 0.5kb upstream 0.5kb upstream 500 false Chr02: 38721766-38722265 Glycine max
Glyma.02G202200 0.5kb downstream 0.5kb downstream 887 true Chr02: 38720879-38721765 Glycine max
Glyma.02G202200 0.5kb downstream 0.5kb downstream 500 false Chr02: 38720879-38721378 Glycine max
Glyma.02G202200 1.0kb upstream 1.0kb upstream 1387 true Chr02: 38721379-38722765 Glycine max
Glyma.02G202200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38721766-38722765 Glycine max
Glyma.02G202200 1.0kb downstream 1.0kb downstream 1387 true Chr02: 38720379-38721765 Glycine max
Glyma.02G202200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38720379-38721378 Glycine max
Glyma.02G202200 2.0kb upstream 2.0kb upstream 2387 true Chr02: 38721379-38723765 Glycine max
Glyma.02G202200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38721766-38723765 Glycine max
Glyma.02G202200 2.0kb downstream 2.0kb downstream 2387 true Chr02: 38719379-38721765 Glycine max
Glyma.02G202200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38719379-38721378 Glycine max
Glyma.02G202200 5.0kb upstream 5.0kb upstream 5387 true Chr02: 38721379-38726765 Glycine max
Glyma.02G202200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38721766-38726765 Glycine max
Glyma.02G202200 5.0kb downstream 5.0kb downstream 5387 true Chr02: 38716379-38721765 Glycine max
Glyma.02G202200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38716379-38721378 Glycine max
Glyma.02G202200 10.0kb upstream 10.0kb upstream 10387 true Chr02: 38721379-38731765 Glycine max
Glyma.02G202200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38721766-38731765 Glycine max
Glyma.02G202200 10.0kb downstream 10.0kb downstream 10387 true Chr02: 38711379-38721765 Glycine max
Glyma.02G202200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38711379-38721378 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304573 5265 Fabidae View MSA
124068119 5270 Rosid View MSA
123749819 5271 Pentapetalae View MSA
122788630 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.750223 0.0 2.9654   Low
cufflinks 1.59075 0.0 6.10404    
cufflinks 0.841762 0.0 3.30891    
cufflinks 0.815893 0.0 3.2114    
cufflinks 2.72416 0.0 10.1789    
cufflinks 15.4238 0.0 50.1452   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.9566 0.0 24.5994    
cufflinks 4.59496 0.0 16.7229    
cufflinks 3.295       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.294        
cufflinks 1.668       High
cufflinks 1.126        
cufflinks 0.495        
cufflinks 1.029        
cufflinks 0.495        
cufflinks 0.805        
cufflinks 1.75       High
cufflinks 0.235       Low
cufflinks 0.099       Low
cufflinks 0.706        
cufflinks 0.539        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.169        
cufflinks 0.21       Low

0 Strain