Gene : Glyma.19G028600 G. max Wm82.a2.v1

Defline:  (1 of 3) PTHR14326//PTHR14326:SF18 - TARGETING PROTEIN FOR XKLP2 Genomic Order:  286
Name:  ? Glyma.19G028600 Secondary Identifier:  ? PAC:30511986

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G028600 0.5kb upstream 0.5kb upstream 3664 true Chr19: 3567231-3570894 Glycine max
Glyma.19G028600 0.5kb upstream 0.5kb upstream 500 false Chr19: 3567231-3567730 Glycine max
Glyma.19G028600 0.5kb downstream 0.5kb downstream 3664 true Chr19: 3567731-3571394 Glycine max
Glyma.19G028600 0.5kb downstream 0.5kb downstream 500 false Chr19: 3570895-3571394 Glycine max
Glyma.19G028600 1.0kb upstream 1.0kb upstream 4164 true Chr19: 3566731-3570894 Glycine max
Glyma.19G028600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3566731-3567730 Glycine max
Glyma.19G028600 1.0kb downstream 1.0kb downstream 4164 true Chr19: 3567731-3571894 Glycine max
Glyma.19G028600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3570895-3571894 Glycine max
Glyma.19G028600 2.0kb upstream 2.0kb upstream 5164 true Chr19: 3565731-3570894 Glycine max
Glyma.19G028600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3565731-3567730 Glycine max
Glyma.19G028600 2.0kb downstream 2.0kb downstream 5164 true Chr19: 3567731-3572894 Glycine max
Glyma.19G028600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3570895-3572894 Glycine max
Glyma.19G028600 5.0kb upstream 5.0kb upstream 8164 true Chr19: 3562731-3570894 Glycine max
Glyma.19G028600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3562731-3567730 Glycine max
Glyma.19G028600 5.0kb downstream 5.0kb downstream 8164 true Chr19: 3567731-3575894 Glycine max
Glyma.19G028600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3570895-3575894 Glycine max
Glyma.19G028600 10.0kb upstream 10.0kb upstream 13164 true Chr19: 3557731-3570894 Glycine max
Glyma.19G028600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3557731-3567730 Glycine max
Glyma.19G028600 10.0kb downstream 10.0kb downstream 13164 true Chr19: 3567731-3580894 Glycine max
Glyma.19G028600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3570895-3580894 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302187 5265 Fabidae View MSA
124067436 5270 Rosid View MSA
123739533 5271 Pentapetalae View MSA
122785675 5272 Eudicot View MSA
122048063 5273 Angiosperm View MSA
121310840 5274 Embryophyte View MSA
123348227 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0485519 0.0 0.195794 Low Low
cufflinks 3.35869 0.0 9.93177   High
cufflinks 0.204901 0.0 0.779969 Low Low
cufflinks 0.898878 0.0 3.13644    
cufflinks 1.67577 0.0 5.46919    
cufflinks 1.37281 0.0 4.60373    
cufflinks 0.87094 0.0 3.05647    
cufflinks 1.0137 0.0 3.49805    
cufflinks 2.117 0.0 6.68166    
cufflinks 1.678        
cufflinks 0.403       Low
cufflinks 1.261        
cufflinks 2.678        
cufflinks 3.412       High
cufflinks 0.169       Low
cufflinks 2.729        
cufflinks 0.557        
cufflinks 1.072        
cufflinks 3.624       High
cufflinks 2.089        
cufflinks 0.348       Low
cufflinks 2.406        
cufflinks 2.982        
cufflinks 0.219       Low
cufflinks 2.014        
cufflinks 0.546        

0 Strain