Gene : Glyma.19G029000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF12830 - Sister chromatid cohesion C-terminus (Nipped-B_C) Genomic Order:  290
Name:  ? Glyma.19G029000 Secondary Identifier:  ? PAC:30512045
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G029000 0.5kb upstream 0.5kb upstream 5398 true Chr19: 3593924-3599321 Glycine max
Glyma.19G029000 0.5kb upstream 0.5kb upstream 500 false Chr19: 3598822-3599321 Glycine max
Glyma.19G029000 0.5kb downstream 0.5kb downstream 5398 true Chr19: 3593424-3598821 Glycine max
Glyma.19G029000 0.5kb downstream 0.5kb downstream 500 false Chr19: 3593424-3593923 Glycine max
Glyma.19G029000 1.0kb upstream 1.0kb upstream 5898 true Chr19: 3593924-3599821 Glycine max
Glyma.19G029000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3598822-3599821 Glycine max
Glyma.19G029000 1.0kb downstream 1.0kb downstream 5898 true Chr19: 3592924-3598821 Glycine max
Glyma.19G029000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3592924-3593923 Glycine max
Glyma.19G029000 2.0kb upstream 2.0kb upstream 6898 true Chr19: 3593924-3600821 Glycine max
Glyma.19G029000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3598822-3600821 Glycine max
Glyma.19G029000 2.0kb downstream 2.0kb downstream 6898 true Chr19: 3591924-3598821 Glycine max
Glyma.19G029000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3591924-3593923 Glycine max
Glyma.19G029000 5.0kb upstream 5.0kb upstream 9898 true Chr19: 3593924-3603821 Glycine max
Glyma.19G029000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3598822-3603821 Glycine max
Glyma.19G029000 5.0kb downstream 5.0kb downstream 9898 true Chr19: 3588924-3598821 Glycine max
Glyma.19G029000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3588924-3593923 Glycine max
Glyma.19G029000 10.0kb upstream 10.0kb upstream 14898 true Chr19: 3593924-3608821 Glycine max
Glyma.19G029000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3598822-3608821 Glycine max
Glyma.19G029000 10.0kb downstream 10.0kb downstream 14898 true Chr19: 3583924-3598821 Glycine max
Glyma.19G029000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3583924-3593923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613780 5273 Angiosperm Singleton cluster - no MSA
122247921 5265 Fabidae Singleton cluster - no MSA
123991600 5270 Rosid Singleton cluster - no MSA
123566539 5271 Pentapetalae Singleton cluster - no MSA
122601296 5272 Eudicot Singleton cluster - no MSA
120885993 5274 Embryophyte Singleton cluster - no MSA
123426246 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.43235 0.0 26.5973    
cufflinks 4.90943 0.0 18.9663    
cufflinks 14.7976 0.0 51.221   High
cufflinks 4.70846 0.0 18.4569    
cufflinks 4.38642 0.0 17.2058    
cufflinks 3.48291 0.0 14.5015    
cufflinks 5.10178 0.0 19.6905    
cufflinks 4.15442 0.0 16.5467    
cufflinks 4.43729 0.0 17.3875    
cufflinks 0.896       Low
cufflinks 2.278        
cufflinks 2.077        
cufflinks 1.124       Low
cufflinks 1.117       Low
cufflinks 2.895       High
cufflinks 2.271        
cufflinks 0.914       Low
cufflinks 1.733        
cufflinks 1.805        
cufflinks 2.54        
cufflinks 1.841        
cufflinks 2.709       High
cufflinks 2.525        
cufflinks 2.124        
cufflinks 2.298        
cufflinks 1.707        

0 Strain