Gene : Glyma.02G205800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  2058
Name:  ? Glyma.02G205800 Secondary Identifier:  ? PAC:30507392
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G205800 0.5kb upstream 0.5kb upstream 5859 true Chr02: 39076470-39082328 Glycine max
Glyma.02G205800 0.5kb upstream 0.5kb upstream 500 false Chr02: 39076470-39076969 Glycine max
Glyma.02G205800 0.5kb downstream 0.5kb downstream 5859 true Chr02: 39076970-39082828 Glycine max
Glyma.02G205800 0.5kb downstream 0.5kb downstream 500 false Chr02: 39082329-39082828 Glycine max
Glyma.02G205800 1.0kb upstream 1.0kb upstream 6359 true Chr02: 39075970-39082328 Glycine max
Glyma.02G205800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39075970-39076969 Glycine max
Glyma.02G205800 1.0kb downstream 1.0kb downstream 6359 true Chr02: 39076970-39083328 Glycine max
Glyma.02G205800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39082329-39083328 Glycine max
Glyma.02G205800 2.0kb upstream 2.0kb upstream 7359 true Chr02: 39074970-39082328 Glycine max
Glyma.02G205800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39074970-39076969 Glycine max
Glyma.02G205800 2.0kb downstream 2.0kb downstream 7359 true Chr02: 39076970-39084328 Glycine max
Glyma.02G205800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39082329-39084328 Glycine max
Glyma.02G205800 5.0kb upstream 5.0kb upstream 10359 true Chr02: 39071970-39082328 Glycine max
Glyma.02G205800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39071970-39076969 Glycine max
Glyma.02G205800 5.0kb downstream 5.0kb downstream 10359 true Chr02: 39076970-39087328 Glycine max
Glyma.02G205800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39082329-39087328 Glycine max
Glyma.02G205800 10.0kb upstream 10.0kb upstream 15359 true Chr02: 39066970-39082328 Glycine max
Glyma.02G205800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39066970-39076969 Glycine max
Glyma.02G205800 10.0kb downstream 10.0kb downstream 15359 true Chr02: 39076970-39092328 Glycine max
Glyma.02G205800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39082329-39092328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299706 5265 Fabidae View MSA
124065342 5270 Rosid View MSA
123753627 5271 Pentapetalae View MSA
122788990 5272 Eudicot View MSA
122047016 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37273 0.0 6.84103    
cufflinks 2.13597 0.0 6.24283    
cufflinks 0.949048 0.0 3.0937    
cufflinks 30.0022 0.0 87.7884 High High
cufflinks 3.88152 0.0 10.6557    
cufflinks 0.310345 0.0 1.12719    
cufflinks 0.058803 0.0 0.230682 Low Low
cufflinks 34.2201 0.0 102.199 High High
cufflinks 7.44158 0.0 19.8626    
cufflinks 14.709     High High
cufflinks 0.962        
cufflinks 0.993        
cufflinks 4.338       High
cufflinks 0.245       Low
cufflinks 0.756        
cufflinks 1.081        
cufflinks 5.572       High
cufflinks 1.317        
cufflinks 4.398       High
cufflinks 1.164        
cufflinks 2.033        
cufflinks 1.251        
cufflinks 0.785        
cufflinks 0.558       Low
cufflinks 1.036        
cufflinks 1.746        

0 Strain