Gene : Glyma.02G203300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC Genomic Order:  2033
Name:  ? Glyma.02G203300 Secondary Identifier:  ? PAC:30509381
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G203300 0.5kb upstream 0.5kb upstream 6185 true Chr02: 38870926-38877110 Glycine max
Glyma.02G203300 0.5kb upstream 0.5kb upstream 500 false Chr02: 38870926-38871425 Glycine max
Glyma.02G203300 0.5kb downstream 0.5kb downstream 6185 true Chr02: 38871426-38877610 Glycine max
Glyma.02G203300 0.5kb downstream 0.5kb downstream 500 false Chr02: 38877111-38877610 Glycine max
Glyma.02G203300 1.0kb upstream 1.0kb upstream 6685 true Chr02: 38870426-38877110 Glycine max
Glyma.02G203300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38870426-38871425 Glycine max
Glyma.02G203300 1.0kb downstream 1.0kb downstream 6685 true Chr02: 38871426-38878110 Glycine max
Glyma.02G203300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38877111-38878110 Glycine max
Glyma.02G203300 2.0kb upstream 2.0kb upstream 7685 true Chr02: 38869426-38877110 Glycine max
Glyma.02G203300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38869426-38871425 Glycine max
Glyma.02G203300 2.0kb downstream 2.0kb downstream 7685 true Chr02: 38871426-38879110 Glycine max
Glyma.02G203300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38877111-38879110 Glycine max
Glyma.02G203300 5.0kb upstream 5.0kb upstream 10685 true Chr02: 38866426-38877110 Glycine max
Glyma.02G203300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38866426-38871425 Glycine max
Glyma.02G203300 5.0kb downstream 5.0kb downstream 10685 true Chr02: 38871426-38882110 Glycine max
Glyma.02G203300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38877111-38882110 Glycine max
Glyma.02G203300 10.0kb upstream 10.0kb upstream 15685 true Chr02: 38861426-38877110 Glycine max
Glyma.02G203300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38861426-38871425 Glycine max
Glyma.02G203300 10.0kb downstream 10.0kb downstream 15685 true Chr02: 38871426-38887110 Glycine max
Glyma.02G203300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38877111-38887110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
122308123 5265 Fabidae View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.8343 0.0 144.04 High High
cufflinks 9.12066 0.0 24.8722    
cufflinks 7.43163 0.0 20.5314    
cufflinks 9.6394 0.0 26.1825    
cufflinks 5.59445 0.0 15.9641    
cufflinks 10.4889 0.0 28.3644    
cufflinks 7.11274 0.0 19.8158    
cufflinks 6.12961 0.0 17.3128    
cufflinks 4.91561 0.0 14.2305    
cufflinks 6.815        
cufflinks 1.951       Low
cufflinks 3.59        
cufflinks 2.774        
cufflinks 1.87       Low
cufflinks 1.798       Low
cufflinks 16.281     High High
cufflinks 18.779     High High
cufflinks 5.112        
cufflinks 6.179        
cufflinks 9.482     High  
cufflinks 3.349        
cufflinks 11.987     High  
cufflinks 29.948     High High
cufflinks 3.251        
cufflinks 15.877     High High
cufflinks 14.269     High  

0 Strain