Gene : Glyma.02G209400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11785//PTHR11785:SF378 - AMINO ACID TRANSPORTER Genomic Order:  2094
Name:  ? Glyma.02G209400 Secondary Identifier:  ? PAC:30506232
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G209400 0.5kb upstream 0.5kb upstream 2351 true Chr02: 39453571-39455921 Glycine max
Glyma.02G209400 0.5kb upstream 0.5kb upstream 500 false Chr02: 39455422-39455921 Glycine max
Glyma.02G209400 0.5kb downstream 0.5kb downstream 2351 true Chr02: 39453071-39455421 Glycine max
Glyma.02G209400 0.5kb downstream 0.5kb downstream 500 false Chr02: 39453071-39453570 Glycine max
Glyma.02G209400 1.0kb upstream 1.0kb upstream 2851 true Chr02: 39453571-39456421 Glycine max
Glyma.02G209400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39455422-39456421 Glycine max
Glyma.02G209400 1.0kb downstream 1.0kb downstream 2851 true Chr02: 39452571-39455421 Glycine max
Glyma.02G209400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39452571-39453570 Glycine max
Glyma.02G209400 2.0kb upstream 2.0kb upstream 3851 true Chr02: 39453571-39457421 Glycine max
Glyma.02G209400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39455422-39457421 Glycine max
Glyma.02G209400 2.0kb downstream 2.0kb downstream 3851 true Chr02: 39451571-39455421 Glycine max
Glyma.02G209400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39451571-39453570 Glycine max
Glyma.02G209400 5.0kb upstream 5.0kb upstream 6851 true Chr02: 39453571-39460421 Glycine max
Glyma.02G209400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39455422-39460421 Glycine max
Glyma.02G209400 5.0kb downstream 5.0kb downstream 6851 true Chr02: 39448571-39455421 Glycine max
Glyma.02G209400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39448571-39453570 Glycine max
Glyma.02G209400 10.0kb upstream 10.0kb upstream 11851 true Chr02: 39453571-39465421 Glycine max
Glyma.02G209400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39455422-39465421 Glycine max
Glyma.02G209400 10.0kb downstream 10.0kb downstream 11851 true Chr02: 39443571-39455421 Glycine max
Glyma.02G209400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39443571-39453570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309447 5265 Fabidae View MSA
124071133 5270 Rosid View MSA
123751065 5271 Pentapetalae View MSA
122791339 5272 Eudicot View MSA
122044006 5273 Angiosperm View MSA
121310225 5274 Embryophyte View MSA
123347773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76912 0.0 14.0855    
cufflinks 4.20601 0.0 12.676    
cufflinks 6.04633 0.0 17.4378    
cufflinks 5.56293 0.0 16.1475    
cufflinks 11.0866 0.0 30.0427    
cufflinks 27.7472 0.0 74.5231 High High
cufflinks 3.59676 0.0 11.041   Low
cufflinks 8.83996 0.0 24.4228    
cufflinks 7.91257 0.0 22.0131    
cufflinks 4.332        
cufflinks 9.92     High High
cufflinks 4.69        
cufflinks 4.698        
cufflinks 2.828       Low
cufflinks 3.208        
cufflinks 3.592        
cufflinks 10.557     High High
cufflinks 9.357     High High
cufflinks 4.198        
cufflinks 3.937        
cufflinks 4.05        
cufflinks 2.836       Low
cufflinks 2.232       Low
cufflinks 6.782     High  
cufflinks 4.132        
cufflinks 4.827        

0 Strain