Gene : Glyma.02G207000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR20855:SF47 - EXPRESSED PROTEIN Genomic Order:  2070
Name:  ? Glyma.02G207000 Secondary Identifier:  ? PAC:30508982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G207000 0.5kb upstream 0.5kb upstream 3774 true Chr02: 39179892-39183665 Glycine max
Glyma.02G207000 0.5kb upstream 0.5kb upstream 500 false Chr02: 39183166-39183665 Glycine max
Glyma.02G207000 0.5kb downstream 0.5kb downstream 3774 true Chr02: 39179392-39183165 Glycine max
Glyma.02G207000 0.5kb downstream 0.5kb downstream 500 false Chr02: 39179392-39179891 Glycine max
Glyma.02G207000 1.0kb upstream 1.0kb upstream 4274 true Chr02: 39179892-39184165 Glycine max
Glyma.02G207000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39183166-39184165 Glycine max
Glyma.02G207000 1.0kb downstream 1.0kb downstream 4274 true Chr02: 39178892-39183165 Glycine max
Glyma.02G207000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39178892-39179891 Glycine max
Glyma.02G207000 2.0kb upstream 2.0kb upstream 5274 true Chr02: 39179892-39185165 Glycine max
Glyma.02G207000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39183166-39185165 Glycine max
Glyma.02G207000 2.0kb downstream 2.0kb downstream 5274 true Chr02: 39177892-39183165 Glycine max
Glyma.02G207000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39177892-39179891 Glycine max
Glyma.02G207000 5.0kb upstream 5.0kb upstream 8274 true Chr02: 39179892-39188165 Glycine max
Glyma.02G207000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39183166-39188165 Glycine max
Glyma.02G207000 5.0kb downstream 5.0kb downstream 8274 true Chr02: 39174892-39183165 Glycine max
Glyma.02G207000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39174892-39179891 Glycine max
Glyma.02G207000 10.0kb upstream 10.0kb upstream 13274 true Chr02: 39179892-39193165 Glycine max
Glyma.02G207000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39183166-39193165 Glycine max
Glyma.02G207000 10.0kb downstream 10.0kb downstream 13274 true Chr02: 39169892-39183165 Glycine max
Glyma.02G207000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39169892-39179891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299675 5265 Fabidae View MSA
124066963 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.74687 0.0 18.8304   Low
cufflinks 6.87487 0.0 23.7541    
cufflinks 3.98983 0.0 16.6423   Low
cufflinks 13.3527 0.0 48.0987    
cufflinks 16.7463 0.0 59.0227   High
cufflinks 6.98911 0.0 28.2595    
cufflinks 8.30752 0.0 32.329    
cufflinks 8.96874 0.0 35.4511    
cufflinks 21.6014 0.0 75.2527 High High
cufflinks 2.155        
cufflinks 1.928        
cufflinks 1.939        
cufflinks 3.052        
cufflinks 4.475       High
cufflinks 3.481       High
cufflinks 1.594        
cufflinks 3.237       High
cufflinks 3.172        
cufflinks 1.264       Low
cufflinks 1.316       Low
cufflinks 2.33        
cufflinks 1.37       Low
cufflinks 2.446        
cufflinks 1.898        
cufflinks 1.255       Low
cufflinks 2.436        

0 Strain