Gene : Glyma.19G032000 G. max Wm82.a2.v1
Defline:  (1 of 7) K18635 - protein SPIRAL1 and related proteins (SPR1) Genomic Order:  320
Name:  ? Glyma.19G032000 Secondary Identifier:  ? PAC:30511908
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G032000 0.5kb upstream 0.5kb upstream 2832 true Chr19: 4048143-4050974 Glycine max
Glyma.19G032000 0.5kb upstream 0.5kb upstream 500 false Chr19: 4048143-4048642 Glycine max
Glyma.19G032000 0.5kb downstream 0.5kb downstream 2832 true Chr19: 4048643-4051474 Glycine max
Glyma.19G032000 0.5kb downstream 0.5kb downstream 500 false Chr19: 4050975-4051474 Glycine max
Glyma.19G032000 1.0kb upstream 1.0kb upstream 3332 true Chr19: 4047643-4050974 Glycine max
Glyma.19G032000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 4047643-4048642 Glycine max
Glyma.19G032000 1.0kb downstream 1.0kb downstream 3332 true Chr19: 4048643-4051974 Glycine max
Glyma.19G032000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 4050975-4051974 Glycine max
Glyma.19G032000 2.0kb upstream 2.0kb upstream 4332 true Chr19: 4046643-4050974 Glycine max
Glyma.19G032000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 4046643-4048642 Glycine max
Glyma.19G032000 2.0kb downstream 2.0kb downstream 4332 true Chr19: 4048643-4052974 Glycine max
Glyma.19G032000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 4050975-4052974 Glycine max
Glyma.19G032000 5.0kb upstream 5.0kb upstream 7332 true Chr19: 4043643-4050974 Glycine max
Glyma.19G032000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 4043643-4048642 Glycine max
Glyma.19G032000 5.0kb downstream 5.0kb downstream 7332 true Chr19: 4048643-4055974 Glycine max
Glyma.19G032000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 4050975-4055974 Glycine max
Glyma.19G032000 10.0kb upstream 10.0kb upstream 12332 true Chr19: 4038643-4050974 Glycine max
Glyma.19G032000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 4038643-4048642 Glycine max
Glyma.19G032000 10.0kb downstream 10.0kb downstream 12332 true Chr19: 4048643-4060974 Glycine max
Glyma.19G032000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 4050975-4060974 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314267 5265 Fabidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.3077 0.0 198.878 High Low
cufflinks 203.157 0.0 618.2 High  
cufflinks 92.051 0.0 253.761 High Low
cufflinks 175.554 0.0 524.201 High  
cufflinks 251.96 0.0 803.77 High  
cufflinks 328.601 0.0 1106.54 High High
cufflinks 151.397 0.0 443.218 High  
cufflinks 307.438 0.0 1016.2 High High
cufflinks 171.005 0.0 508.199 High  
cufflinks 231.382     High High
cufflinks 12.849     High Low
cufflinks 43.499     High  
cufflinks 124.515     High  
cufflinks 152.475     High High
cufflinks 10.654     High Low
cufflinks 108.178     High  
cufflinks 46.423     High  
cufflinks 105.688     High  
cufflinks 90.11     High  
cufflinks 78.54     High  
cufflinks 25.111     High  
cufflinks 85.506     High  
cufflinks 108.077     High  
cufflinks 12.639     High Low
cufflinks 88.108     High  
cufflinks 33.843     High  

0 Strain