Gene : Glyma.02G213500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  2135
Name:  ? Glyma.02G213500 Secondary Identifier:  ? PAC:30509263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G213500 0.5kb upstream 0.5kb upstream 1977 true Chr02: 39966501-39968477 Glycine max
Glyma.02G213500 0.5kb upstream 0.5kb upstream 500 false Chr02: 39967978-39968477 Glycine max
Glyma.02G213500 0.5kb downstream 0.5kb downstream 1977 true Chr02: 39966001-39967977 Glycine max
Glyma.02G213500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39966001-39966500 Glycine max
Glyma.02G213500 1.0kb upstream 1.0kb upstream 2477 true Chr02: 39966501-39968977 Glycine max
Glyma.02G213500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39967978-39968977 Glycine max
Glyma.02G213500 1.0kb downstream 1.0kb downstream 2477 true Chr02: 39965501-39967977 Glycine max
Glyma.02G213500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39965501-39966500 Glycine max
Glyma.02G213500 2.0kb upstream 2.0kb upstream 3477 true Chr02: 39966501-39969977 Glycine max
Glyma.02G213500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39967978-39969977 Glycine max
Glyma.02G213500 2.0kb downstream 2.0kb downstream 3477 true Chr02: 39964501-39967977 Glycine max
Glyma.02G213500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39964501-39966500 Glycine max
Glyma.02G213500 5.0kb upstream 5.0kb upstream 6477 true Chr02: 39966501-39972977 Glycine max
Glyma.02G213500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39967978-39972977 Glycine max
Glyma.02G213500 5.0kb downstream 5.0kb downstream 6477 true Chr02: 39961501-39967977 Glycine max
Glyma.02G213500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39961501-39966500 Glycine max
Glyma.02G213500 10.0kb upstream 10.0kb upstream 11477 true Chr02: 39966501-39977977 Glycine max
Glyma.02G213500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39967978-39977977 Glycine max
Glyma.02G213500 10.0kb downstream 10.0kb downstream 11477 true Chr02: 39956501-39967977 Glycine max
Glyma.02G213500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39956501-39966500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254960 5265 Fabidae View MSA
123996885 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8536 0.0 60.9712 High High
cufflinks 2.35992 0.0 7.88603    
cufflinks 13.1903 0.0 36.0225   High
cufflinks 1.06183 0.0 3.81777   Low
cufflinks 3.21996 0.0 10.166    
cufflinks 3.77549 0.0 11.7289    
cufflinks 2.78838 0.0 9.02414    
cufflinks 15.6592 0.0 42.1406   High
cufflinks 2.46079 0.0 8.13143    
cufflinks 0.27       Low
cufflinks 2.726        
cufflinks 3.301        
cufflinks 0.09     Low Low
cufflinks 0.391       Low
cufflinks 0.862        
cufflinks 2.817        
cufflinks 3.782        
cufflinks 2.734        
cufflinks 1.298        
cufflinks 2.945        
cufflinks 6.372     High High
cufflinks 2.025        
cufflinks 0.947        
cufflinks 5.245       High
cufflinks 2.131        
cufflinks 3.369        

0 Strain