Gene : Glyma.02G218300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  2183
Name:  ? Glyma.02G218300 Secondary Identifier:  ? PAC:30507850
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5188 Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G218300 0.5kb upstream 0.5kb upstream 4303 true Chr02: 40588552-40592854 Glycine max
Glyma.02G218300 0.5kb upstream 0.5kb upstream 500 false Chr02: 40592355-40592854 Glycine max
Glyma.02G218300 0.5kb downstream 0.5kb downstream 4303 true Chr02: 40588052-40592354 Glycine max
Glyma.02G218300 0.5kb downstream 0.5kb downstream 500 false Chr02: 40588052-40588551 Glycine max
Glyma.02G218300 1.0kb upstream 1.0kb upstream 4803 true Chr02: 40588552-40593354 Glycine max
Glyma.02G218300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40592355-40593354 Glycine max
Glyma.02G218300 1.0kb downstream 1.0kb downstream 4803 true Chr02: 40587552-40592354 Glycine max
Glyma.02G218300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40587552-40588551 Glycine max
Glyma.02G218300 2.0kb upstream 2.0kb upstream 5803 true Chr02: 40588552-40594354 Glycine max
Glyma.02G218300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40592355-40594354 Glycine max
Glyma.02G218300 2.0kb downstream 2.0kb downstream 5803 true Chr02: 40586552-40592354 Glycine max
Glyma.02G218300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40586552-40588551 Glycine max
Glyma.02G218300 5.0kb upstream 5.0kb upstream 8803 true Chr02: 40588552-40597354 Glycine max
Glyma.02G218300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40592355-40597354 Glycine max
Glyma.02G218300 5.0kb downstream 5.0kb downstream 8803 true Chr02: 40583552-40592354 Glycine max
Glyma.02G218300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40583552-40588551 Glycine max
Glyma.02G218300 10.0kb upstream 10.0kb upstream 13803 true Chr02: 40588552-40602354 Glycine max
Glyma.02G218300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40592355-40602354 Glycine max
Glyma.02G218300 10.0kb downstream 10.0kb downstream 13803 true Chr02: 40578552-40592354 Glycine max
Glyma.02G218300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40578552-40588551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308158 5265 Fabidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3522 0.0 60.8965 High High
cufflinks 20.4428 0.0 55.3778 High High
cufflinks 2.30631 0.0 6.99111   Low
cufflinks 6.11815 0.0 16.6834    
cufflinks 5.13816 0.0 14.2087    
cufflinks 3.674 0.0 10.5103    
cufflinks 2.75598 0.0 8.17144    
cufflinks 2.68716 0.0 7.9679    
cufflinks 11.7317 0.0 31.2986    
cufflinks 16.029     High  
cufflinks 0.009     Low Low
cufflinks 6.63        
cufflinks 0.022     Low Low
cufflinks 0.029     Low Low
cufflinks 6.807     High  
cufflinks 55.195     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.735     High  
cufflinks 16.911     High  
cufflinks 58.76     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 62.321     High  
cufflinks 42.629     High  
cufflinks 0.005     Low Low
cufflinks 71.817     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain