Gene : Glyma.19G033500 G. max Wm82.a2.v1
Defline:  (1 of 24) PF04833 - COBRA-like protein (COBRA) Genomic Order:  335
Name:  ? Glyma.19G033500 Secondary Identifier:  ? PAC:30514692
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G033500 0.5kb upstream 0.5kb upstream 5163 true Chr19: 4318449-4323611 Glycine max
Glyma.19G033500 0.5kb upstream 0.5kb upstream 500 false Chr19: 4318449-4318948 Glycine max
Glyma.19G033500 0.5kb downstream 0.5kb downstream 5163 true Chr19: 4318949-4324111 Glycine max
Glyma.19G033500 0.5kb downstream 0.5kb downstream 500 false Chr19: 4323612-4324111 Glycine max
Glyma.19G033500 1.0kb upstream 1.0kb upstream 5663 true Chr19: 4317949-4323611 Glycine max
Glyma.19G033500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 4317949-4318948 Glycine max
Glyma.19G033500 1.0kb downstream 1.0kb downstream 5663 true Chr19: 4318949-4324611 Glycine max
Glyma.19G033500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 4323612-4324611 Glycine max
Glyma.19G033500 2.0kb upstream 2.0kb upstream 6663 true Chr19: 4316949-4323611 Glycine max
Glyma.19G033500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 4316949-4318948 Glycine max
Glyma.19G033500 2.0kb downstream 2.0kb downstream 6663 true Chr19: 4318949-4325611 Glycine max
Glyma.19G033500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 4323612-4325611 Glycine max
Glyma.19G033500 5.0kb upstream 5.0kb upstream 9663 true Chr19: 4313949-4323611 Glycine max
Glyma.19G033500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 4313949-4318948 Glycine max
Glyma.19G033500 5.0kb downstream 5.0kb downstream 9663 true Chr19: 4318949-4328611 Glycine max
Glyma.19G033500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 4323612-4328611 Glycine max
Glyma.19G033500 10.0kb upstream 10.0kb upstream 14663 true Chr19: 4308949-4323611 Glycine max
Glyma.19G033500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 4308949-4318948 Glycine max
Glyma.19G033500 10.0kb downstream 10.0kb downstream 14663 true Chr19: 4318949-4333611 Glycine max
Glyma.19G033500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 4323612-4333611 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311980 5265 Fabidae View MSA
124062933 5270 Rosid View MSA
123750183 5271 Pentapetalae View MSA
122789403 5272 Eudicot View MSA
122044037 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06543 0.0 4.60615    
cufflinks 0.194536 0.0 0.964392 Low Low
cufflinks 6.02854 0.0 24.6763   High
cufflinks 0.825323 0.0 3.70608    
cufflinks 0.591398 0.0 2.72895    
cufflinks 0.878513 0.0 3.83272    
cufflinks 1.86853 0.0 6.80471    
cufflinks 0.221788 0.0 1.1236 Low Low
cufflinks 0.89309 0.0 3.9091    
cufflinks 0.092     Low  
cufflinks 2.976       High
cufflinks 0.935        
cufflinks 0.091     Low  
cufflinks 0.056     Low Low
cufflinks 11.853     High High
cufflinks 0.087     Low  
cufflinks 3.375       High
cufflinks 0.351        
cufflinks 0.045     Low Low
cufflinks 0.126        
cufflinks 3.802       High
cufflinks 0.161        
cufflinks 0.161        
cufflinks 0.862        
cufflinks 0.09     Low  
cufflinks 3.133       High

0 Strain