Gene : Glyma.19G033600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Genomic Order:  336
Name:  ? Glyma.19G033600 Secondary Identifier:  ? PAC:30514368
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G033600 0.5kb upstream 0.5kb upstream 3630 true Chr19: 4323838-4327467 Glycine max
Glyma.19G033600 0.5kb upstream 0.5kb upstream 500 false Chr19: 4326968-4327467 Glycine max
Glyma.19G033600 0.5kb downstream 0.5kb downstream 3630 true Chr19: 4323338-4326967 Glycine max
Glyma.19G033600 0.5kb downstream 0.5kb downstream 500 false Chr19: 4323338-4323837 Glycine max
Glyma.19G033600 1.0kb upstream 1.0kb upstream 4130 true Chr19: 4323838-4327967 Glycine max
Glyma.19G033600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 4326968-4327967 Glycine max
Glyma.19G033600 1.0kb downstream 1.0kb downstream 4130 true Chr19: 4322838-4326967 Glycine max
Glyma.19G033600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 4322838-4323837 Glycine max
Glyma.19G033600 2.0kb upstream 2.0kb upstream 5130 true Chr19: 4323838-4328967 Glycine max
Glyma.19G033600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 4326968-4328967 Glycine max
Glyma.19G033600 2.0kb downstream 2.0kb downstream 5130 true Chr19: 4321838-4326967 Glycine max
Glyma.19G033600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 4321838-4323837 Glycine max
Glyma.19G033600 5.0kb upstream 5.0kb upstream 8130 true Chr19: 4323838-4331967 Glycine max
Glyma.19G033600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 4326968-4331967 Glycine max
Glyma.19G033600 5.0kb downstream 5.0kb downstream 8130 true Chr19: 4318838-4326967 Glycine max
Glyma.19G033600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 4318838-4323837 Glycine max
Glyma.19G033600 10.0kb upstream 10.0kb upstream 13130 true Chr19: 4323838-4336967 Glycine max
Glyma.19G033600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 4326968-4336967 Glycine max
Glyma.19G033600 10.0kb downstream 10.0kb downstream 13130 true Chr19: 4313838-4326967 Glycine max
Glyma.19G033600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 4313838-4323837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311331 5265 Fabidae View MSA
124068379 5270 Rosid View MSA
123742644 5271 Pentapetalae View MSA
122793742 5272 Eudicot View MSA
122043541 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.854882 0.0 3.81158   Low
cufflinks 1.62497 0.0 6.29725    
cufflinks 1.00268 0.0 5.78417   Low
cufflinks 12.602 0.0 44.5779    
cufflinks 4.14136 0.0 16.6851    
cufflinks 1.64452 0.0 6.27062    
cufflinks 18.1862 0.0 63.4213   High
cufflinks 26.2745 0.0 79.8058 High High
cufflinks 6.69798 0.0 22.3839    
cufflinks 4.505       High
cufflinks 0.131       Low
cufflinks 0.223        
cufflinks 2.645       High
cufflinks 0.485        
cufflinks 0.118       Low
cufflinks 0.87        
cufflinks 1.116        
cufflinks 0.677        
cufflinks 0.539        
cufflinks 0.663        
cufflinks 0.304        
cufflinks 0.907        
cufflinks 0.95        
cufflinks 0.155       Low
cufflinks 0.653        
cufflinks 0.561        

0 Strain