Gene : Glyma.19G019400 G. max Wm82.a2.v1
Defline:  (1 of 788) PF13041 - PPR repeat family (PPR_2) Genomic Order:  194
Name:  ? Glyma.19G019400 Secondary Identifier:  ? PAC:30511423
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G019400 0.5kb upstream 0.5kb upstream 5409 true Chr19: 2066612-2072020 Glycine max
Glyma.19G019400 0.5kb upstream 0.5kb upstream 500 false Chr19: 2071521-2072020 Glycine max
Glyma.19G019400 0.5kb downstream 0.5kb downstream 5409 true Chr19: 2066112-2071520 Glycine max
Glyma.19G019400 0.5kb downstream 0.5kb downstream 500 false Chr19: 2066112-2066611 Glycine max
Glyma.19G019400 1.0kb upstream 1.0kb upstream 5909 true Chr19: 2066612-2072520 Glycine max
Glyma.19G019400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2071521-2072520 Glycine max
Glyma.19G019400 1.0kb downstream 1.0kb downstream 5909 true Chr19: 2065612-2071520 Glycine max
Glyma.19G019400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2065612-2066611 Glycine max
Glyma.19G019400 2.0kb upstream 2.0kb upstream 6909 true Chr19: 2066612-2073520 Glycine max
Glyma.19G019400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2071521-2073520 Glycine max
Glyma.19G019400 2.0kb downstream 2.0kb downstream 6909 true Chr19: 2064612-2071520 Glycine max
Glyma.19G019400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2064612-2066611 Glycine max
Glyma.19G019400 5.0kb upstream 5.0kb upstream 9909 true Chr19: 2066612-2076520 Glycine max
Glyma.19G019400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2071521-2076520 Glycine max
Glyma.19G019400 5.0kb downstream 5.0kb downstream 9909 true Chr19: 2061612-2071520 Glycine max
Glyma.19G019400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2061612-2066611 Glycine max
Glyma.19G019400 10.0kb upstream 10.0kb upstream 14909 true Chr19: 2066612-2081520 Glycine max
Glyma.19G019400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2071521-2081520 Glycine max
Glyma.19G019400 10.0kb downstream 10.0kb downstream 14909 true Chr19: 2056612-2071520 Glycine max
Glyma.19G019400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2056612-2066611 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122301081 5265 Fabidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53578 0.0 7.84855   High
cufflinks 1.6409 0.0 5.38625    
cufflinks 1.33431 0.0 4.48524    
cufflinks 0.615758 0.0 2.22084   Low
cufflinks 1.64493 0.0 5.40801    
cufflinks 1.29293 0.0 4.37524    
cufflinks 0.457714 0.0 1.68331   Low
cufflinks 0.984478 0.0 3.42453    
cufflinks 1.31076 0.0 4.4245    
cufflinks 0.703        
cufflinks 0.723        
cufflinks 0.853        
cufflinks 1.344        
cufflinks 1.584        
cufflinks 0.456       Low
cufflinks 2.082       High
cufflinks 0.363       Low
cufflinks 1.183        
cufflinks 1.629        
cufflinks 1.988       High
cufflinks 0.84        
cufflinks 2.193       High
cufflinks 1.725        
cufflinks 0.997        
cufflinks 1.726        
cufflinks 0.488       Low

0 Strain