Gene : Glyma.02G152000 G. max Wm82.a2.v1
Defline:  (1 of 11) KOG0144 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  1520
Name:  ? Glyma.02G152000 Secondary Identifier:  ? PAC:30510459
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G152000 0.5kb upstream 0.5kb upstream 4979 true Chr02: 15616485-15621463 Glycine max
Glyma.02G152000 0.5kb upstream 0.5kb upstream 500 false Chr02: 15620964-15621463 Glycine max
Glyma.02G152000 0.5kb downstream 0.5kb downstream 4979 true Chr02: 15615985-15620963 Glycine max
Glyma.02G152000 0.5kb downstream 0.5kb downstream 500 false Chr02: 15615985-15616484 Glycine max
Glyma.02G152000 1.0kb upstream 1.0kb upstream 5479 true Chr02: 15616485-15621963 Glycine max
Glyma.02G152000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15620964-15621963 Glycine max
Glyma.02G152000 1.0kb downstream 1.0kb downstream 5479 true Chr02: 15615485-15620963 Glycine max
Glyma.02G152000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15615485-15616484 Glycine max
Glyma.02G152000 2.0kb upstream 2.0kb upstream 6479 true Chr02: 15616485-15622963 Glycine max
Glyma.02G152000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15620964-15622963 Glycine max
Glyma.02G152000 2.0kb downstream 2.0kb downstream 6479 true Chr02: 15614485-15620963 Glycine max
Glyma.02G152000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15614485-15616484 Glycine max
Glyma.02G152000 5.0kb upstream 5.0kb upstream 9479 true Chr02: 15616485-15625963 Glycine max
Glyma.02G152000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15620964-15625963 Glycine max
Glyma.02G152000 5.0kb downstream 5.0kb downstream 9479 true Chr02: 15611485-15620963 Glycine max
Glyma.02G152000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15611485-15616484 Glycine max
Glyma.02G152000 10.0kb upstream 10.0kb upstream 14479 true Chr02: 15616485-15630963 Glycine max
Glyma.02G152000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15620964-15630963 Glycine max
Glyma.02G152000 10.0kb downstream 10.0kb downstream 14479 true Chr02: 15606485-15620963 Glycine max
Glyma.02G152000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15606485-15616484 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255329 5265 Fabidae View MSA
124062995 5270 Rosid View MSA
123747202 5271 Pentapetalae View MSA
122791871 5272 Eudicot View MSA
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05735 0.0 9.57156    
cufflinks 2.43577 0.0 10.5944    
cufflinks 10.8153 0.0 37.6386   High
cufflinks 1.02765 0.0 5.64154   Low
cufflinks 4.19395 0.0 15.4138    
cufflinks 3.17416 0.0 12.8558    
cufflinks 6.28279 0.0 20.8062   High
cufflinks 2.31322 0.0 10.2625    
cufflinks 2.41469 0.0 10.5109    
cufflinks 1.027        
cufflinks 0.571        
cufflinks 1.338       High
cufflinks 1.351       High
cufflinks 1.575       High
cufflinks 0.289       Low
cufflinks 0.683        
cufflinks 0.403        
cufflinks 0.296       Low
cufflinks 0.801        
cufflinks 0.537        
cufflinks 0.52        
cufflinks 0.617        
cufflinks 1.192       High
cufflinks 0.822        
cufflinks 0.496        
cufflinks 0.45        

0 Strain