Gene : Glyma.02G149600 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  1496
Name:  ? Glyma.02G149600 Secondary Identifier:  ? PAC:30506210
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G149600 0.5kb upstream 0.5kb upstream 4862 true Chr02: 15378755-15383616 Glycine max
Glyma.02G149600 0.5kb upstream 0.5kb upstream 500 false Chr02: 15383117-15383616 Glycine max
Glyma.02G149600 0.5kb downstream 0.5kb downstream 4862 true Chr02: 15378255-15383116 Glycine max
Glyma.02G149600 0.5kb downstream 0.5kb downstream 500 false Chr02: 15378255-15378754 Glycine max
Glyma.02G149600 1.0kb upstream 1.0kb upstream 5362 true Chr02: 15378755-15384116 Glycine max
Glyma.02G149600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15383117-15384116 Glycine max
Glyma.02G149600 1.0kb downstream 1.0kb downstream 5362 true Chr02: 15377755-15383116 Glycine max
Glyma.02G149600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15377755-15378754 Glycine max
Glyma.02G149600 2.0kb upstream 2.0kb upstream 6362 true Chr02: 15378755-15385116 Glycine max
Glyma.02G149600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15383117-15385116 Glycine max
Glyma.02G149600 2.0kb downstream 2.0kb downstream 6362 true Chr02: 15376755-15383116 Glycine max
Glyma.02G149600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15376755-15378754 Glycine max
Glyma.02G149600 5.0kb upstream 5.0kb upstream 9362 true Chr02: 15378755-15388116 Glycine max
Glyma.02G149600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15383117-15388116 Glycine max
Glyma.02G149600 5.0kb downstream 5.0kb downstream 9362 true Chr02: 15373755-15383116 Glycine max
Glyma.02G149600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15373755-15378754 Glycine max
Glyma.02G149600 10.0kb upstream 10.0kb upstream 14362 true Chr02: 15378755-15393116 Glycine max
Glyma.02G149600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15383117-15393116 Glycine max
Glyma.02G149600 10.0kb downstream 10.0kb downstream 14362 true Chr02: 15368755-15383116 Glycine max
Glyma.02G149600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15368755-15378754 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122309857 5265 Fabidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99162 0.0 27.0513    
cufflinks 9.58164 0.0 26.0127    
cufflinks 13.4031 0.0 35.8676    
cufflinks 8.57708 0.0 23.4414   Low
cufflinks 12.4927 0.0 33.4912    
cufflinks 14.0027 0.0 37.4299    
cufflinks 19.0836 0.0 50.9357   High
cufflinks 10.3308 0.0 27.9353    
cufflinks 11.9227 0.0 32.0188    
cufflinks 10.376     High  
cufflinks 32.554     High High
cufflinks 9.088     High  
cufflinks 6.139       Low
cufflinks 5.33       Low
cufflinks 34.073     High High
cufflinks 10.173     High  
cufflinks 29.619     High High
cufflinks 8.175     High  
cufflinks 6.133       Low
cufflinks 9.175     High  
cufflinks 25.136     High High
cufflinks 8.881     High  
cufflinks 6.832        
cufflinks 24.573     High High
cufflinks 9.536     High  
cufflinks 27.458     High High

0 Strain