Gene : Glyma.02G153600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  1536
Name:  ? Glyma.02G153600 Secondary Identifier:  ? PAC:30510300
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G153600 0.5kb upstream 0.5kb upstream 2837 true Chr02: 15772627-15775463 Glycine max
Glyma.02G153600 0.5kb upstream 0.5kb upstream 500 false Chr02: 15774964-15775463 Glycine max
Glyma.02G153600 0.5kb downstream 0.5kb downstream 2837 true Chr02: 15772127-15774963 Glycine max
Glyma.02G153600 0.5kb downstream 0.5kb downstream 500 false Chr02: 15772127-15772626 Glycine max
Glyma.02G153600 1.0kb upstream 1.0kb upstream 3337 true Chr02: 15772627-15775963 Glycine max
Glyma.02G153600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15774964-15775963 Glycine max
Glyma.02G153600 1.0kb downstream 1.0kb downstream 3337 true Chr02: 15771627-15774963 Glycine max
Glyma.02G153600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15771627-15772626 Glycine max
Glyma.02G153600 2.0kb upstream 2.0kb upstream 4337 true Chr02: 15772627-15776963 Glycine max
Glyma.02G153600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15774964-15776963 Glycine max
Glyma.02G153600 2.0kb downstream 2.0kb downstream 4337 true Chr02: 15770627-15774963 Glycine max
Glyma.02G153600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15770627-15772626 Glycine max
Glyma.02G153600 5.0kb upstream 5.0kb upstream 7337 true Chr02: 15772627-15779963 Glycine max
Glyma.02G153600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15774964-15779963 Glycine max
Glyma.02G153600 5.0kb downstream 5.0kb downstream 7337 true Chr02: 15767627-15774963 Glycine max
Glyma.02G153600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15767627-15772626 Glycine max
Glyma.02G153600 10.0kb upstream 10.0kb upstream 12337 true Chr02: 15772627-15784963 Glycine max
Glyma.02G153600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15774964-15784963 Glycine max
Glyma.02G153600 10.0kb downstream 10.0kb downstream 12337 true Chr02: 15762627-15774963 Glycine max
Glyma.02G153600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15762627-15772626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315935 5265 Fabidae View MSA
124073693 5270 Rosid View MSA
123749736 5271 Pentapetalae View MSA
122773292 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.44173 0.0 13.7543    
cufflinks 4.91541 0.0 15.0584    
cufflinks 3.48316 0.0 11.1437    
cufflinks 7.24462 0.0 21.01   High
cufflinks 3.72802 0.0 11.8172    
cufflinks 2.80063 0.0 9.22877   Low
cufflinks 4.18515 0.0 13.0891    
cufflinks 5.51038 0.0 16.5741    
cufflinks 4.22431 0.0 13.1733    
cufflinks 2.558        
cufflinks 0.699       Low
cufflinks 2.236        
cufflinks 2.242        
cufflinks 1.659        
cufflinks 1.745        
cufflinks 3.111        
cufflinks 2.11        
cufflinks 3.108        
cufflinks 4.049       High
cufflinks 2.98        
cufflinks 0.89       Low
cufflinks 3.407        
cufflinks 3.43        
cufflinks 0.615       Low
cufflinks 2.907        
cufflinks 0.748       Low

0 Strain