Gene : Glyma.19G022500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23201:SF21 - GIBBERELLIN-REGULATED PROTEIN 4 Genomic Order:  225
Name:  ? Glyma.19G022500 Secondary Identifier:  ? PAC:30512502
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G022500 0.5kb upstream 0.5kb upstream 3205 true Chr19: 2574142-2577346 Glycine max
Glyma.19G022500 0.5kb upstream 0.5kb upstream 500 false Chr19: 2574142-2574641 Glycine max
Glyma.19G022500 0.5kb downstream 0.5kb downstream 3205 true Chr19: 2574642-2577846 Glycine max
Glyma.19G022500 0.5kb downstream 0.5kb downstream 500 false Chr19: 2577347-2577846 Glycine max
Glyma.19G022500 1.0kb upstream 1.0kb upstream 3705 true Chr19: 2573642-2577346 Glycine max
Glyma.19G022500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2573642-2574641 Glycine max
Glyma.19G022500 1.0kb downstream 1.0kb downstream 3705 true Chr19: 2574642-2578346 Glycine max
Glyma.19G022500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2577347-2578346 Glycine max
Glyma.19G022500 2.0kb upstream 2.0kb upstream 4705 true Chr19: 2572642-2577346 Glycine max
Glyma.19G022500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2572642-2574641 Glycine max
Glyma.19G022500 2.0kb downstream 2.0kb downstream 4705 true Chr19: 2574642-2579346 Glycine max
Glyma.19G022500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2577347-2579346 Glycine max
Glyma.19G022500 5.0kb upstream 5.0kb upstream 7705 true Chr19: 2569642-2577346 Glycine max
Glyma.19G022500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2569642-2574641 Glycine max
Glyma.19G022500 5.0kb downstream 5.0kb downstream 7705 true Chr19: 2574642-2582346 Glycine max
Glyma.19G022500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2577347-2582346 Glycine max
Glyma.19G022500 10.0kb upstream 10.0kb upstream 12705 true Chr19: 2564642-2577346 Glycine max
Glyma.19G022500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2564642-2574641 Glycine max
Glyma.19G022500 10.0kb downstream 10.0kb downstream 12705 true Chr19: 2574642-2587346 Glycine max
Glyma.19G022500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2577347-2587346 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309211 5265 Fabidae View MSA
124069582 5270 Rosid View MSA
123752288 5271 Pentapetalae View MSA
122795520 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73673 0.0 6.3102   Low
cufflinks 74.101 0.0 200.138 High  
cufflinks 8.90184 0.0 26.8898    
cufflinks 21.8329 0.0 59.8211 High  
cufflinks 113.709 0.0 316.666 High High
cufflinks 65.779 0.0 176.771 High  
cufflinks 25.5304 0.0 69.3276 High  
cufflinks 61.5351 0.0 164.975 High  
cufflinks 11.6549 0.0 34.0687    
cufflinks 30.639     High High
cufflinks 0.323       Low
cufflinks 2.712        
cufflinks 5.977        
cufflinks 14.775     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 29.72     High High
cufflinks 1.528        
cufflinks 8.679     High  
cufflinks 20.81     High  
cufflinks 18.859     High  
cufflinks 1.178       Low
cufflinks 25.48     High  
cufflinks 18.773     High  
cufflinks 0.499       Low
cufflinks 17.948     High  
cufflinks 1.962        

0 Strain