Gene : Glyma.02G171200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  1712
Name:  ? Glyma.02G171200 Secondary Identifier:  ? PAC:30507060
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G171200 0.5kb upstream 0.5kb upstream 6093 true Chr02: 26872782-26878874 Glycine max
Glyma.02G171200 0.5kb upstream 0.5kb upstream 500 false Chr02: 26872782-26873281 Glycine max
Glyma.02G171200 0.5kb downstream 0.5kb downstream 6093 true Chr02: 26873282-26879374 Glycine max
Glyma.02G171200 0.5kb downstream 0.5kb downstream 500 false Chr02: 26878875-26879374 Glycine max
Glyma.02G171200 1.0kb upstream 1.0kb upstream 6593 true Chr02: 26872282-26878874 Glycine max
Glyma.02G171200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26872282-26873281 Glycine max
Glyma.02G171200 1.0kb downstream 1.0kb downstream 6593 true Chr02: 26873282-26879874 Glycine max
Glyma.02G171200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26878875-26879874 Glycine max
Glyma.02G171200 2.0kb upstream 2.0kb upstream 7593 true Chr02: 26871282-26878874 Glycine max
Glyma.02G171200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26871282-26873281 Glycine max
Glyma.02G171200 2.0kb downstream 2.0kb downstream 7593 true Chr02: 26873282-26880874 Glycine max
Glyma.02G171200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26878875-26880874 Glycine max
Glyma.02G171200 5.0kb upstream 5.0kb upstream 10593 true Chr02: 26868282-26878874 Glycine max
Glyma.02G171200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26868282-26873281 Glycine max
Glyma.02G171200 5.0kb downstream 5.0kb downstream 10593 true Chr02: 26873282-26883874 Glycine max
Glyma.02G171200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26878875-26883874 Glycine max
Glyma.02G171200 10.0kb upstream 10.0kb upstream 15593 true Chr02: 26863282-26878874 Glycine max
Glyma.02G171200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26863282-26873281 Glycine max
Glyma.02G171200 10.0kb downstream 10.0kb downstream 15593 true Chr02: 26873282-26888874 Glycine max
Glyma.02G171200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26878875-26888874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303438 5265 Fabidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13288 0.0 4.51617   Low
cufflinks 2.20571 0.0 9.66403    
cufflinks 3.93666 0.0 16.699    
cufflinks 4.28078 0.0 17.9257    
cufflinks 3.04795 0.0 12.1452    
cufflinks 1.65437 0.0 6.07877    
cufflinks 0.930014 0.0 4.00083   Low
cufflinks 5.03162 0.0 19.6296   High
cufflinks 5.27545 0.0 20.7472   High
cufflinks 1.94        
cufflinks 0.441        
cufflinks 1.122        
cufflinks 0.719        
cufflinks 0.623        
cufflinks 1.509        
cufflinks 0.593        
cufflinks 7.927     High High
cufflinks 0.913        
cufflinks 0.644        
cufflinks 0.335       Low
cufflinks 0.985        
cufflinks 0.487        
cufflinks 0.847        
cufflinks 0.868        
cufflinks 0.356       Low
cufflinks 2.635       High

0 Strain