Gene : Glyma.02G171700 G. max Wm82.a2.v1
Defline:  (1 of 5) PF09758 - Uncharacterised conserved protein (FPL) Genomic Order:  1717
Name:  ? Glyma.02G171700 Secondary Identifier:  ? PAC:30506681
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G171700 0.5kb upstream 0.5kb upstream 3759 true Chr02: 27040250-27044008 Glycine max
Glyma.02G171700 0.5kb upstream 0.5kb upstream 500 false Chr02: 27043509-27044008 Glycine max
Glyma.02G171700 0.5kb downstream 0.5kb downstream 3759 true Chr02: 27039750-27043508 Glycine max
Glyma.02G171700 0.5kb downstream 0.5kb downstream 500 false Chr02: 27039750-27040249 Glycine max
Glyma.02G171700 1.0kb upstream 1.0kb upstream 4259 true Chr02: 27040250-27044508 Glycine max
Glyma.02G171700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27043509-27044508 Glycine max
Glyma.02G171700 1.0kb downstream 1.0kb downstream 4259 true Chr02: 27039250-27043508 Glycine max
Glyma.02G171700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27039250-27040249 Glycine max
Glyma.02G171700 2.0kb upstream 2.0kb upstream 5259 true Chr02: 27040250-27045508 Glycine max
Glyma.02G171700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27043509-27045508 Glycine max
Glyma.02G171700 2.0kb downstream 2.0kb downstream 5259 true Chr02: 27038250-27043508 Glycine max
Glyma.02G171700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27038250-27040249 Glycine max
Glyma.02G171700 5.0kb upstream 5.0kb upstream 8259 true Chr02: 27040250-27048508 Glycine max
Glyma.02G171700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27043509-27048508 Glycine max
Glyma.02G171700 5.0kb downstream 5.0kb downstream 8259 true Chr02: 27035250-27043508 Glycine max
Glyma.02G171700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27035250-27040249 Glycine max
Glyma.02G171700 10.0kb upstream 10.0kb upstream 13259 true Chr02: 27040250-27053508 Glycine max
Glyma.02G171700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27043509-27053508 Glycine max
Glyma.02G171700 10.0kb downstream 10.0kb downstream 13259 true Chr02: 27030250-27043508 Glycine max
Glyma.02G171700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27030250-27040249 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241981 5265 Fabidae Singleton cluster - no MSA
123986755 5270 Rosid Singleton cluster - no MSA
123749993 5271 Pentapetalae View MSA
122788066 5272 Eudicot View MSA
122048485 5273 Angiosperm View MSA
121345200 5274 Embryophyte View MSA
123428474 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low High
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain