Gene : Glyma.02G177700 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08613 - Cyclin (Cyclin) Genomic Order:  1777
Name:  ? Glyma.02G177700 Secondary Identifier:  ? PAC:30509470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G177700 0.5kb upstream 0.5kb upstream 4650 true Chr02: 29595043-29599692 Glycine max
Glyma.02G177700 0.5kb upstream 0.5kb upstream 500 false Chr02: 29599193-29599692 Glycine max
Glyma.02G177700 0.5kb downstream 0.5kb downstream 4650 true Chr02: 29594543-29599192 Glycine max
Glyma.02G177700 0.5kb downstream 0.5kb downstream 500 false Chr02: 29594543-29595042 Glycine max
Glyma.02G177700 1.0kb upstream 1.0kb upstream 5150 true Chr02: 29595043-29600192 Glycine max
Glyma.02G177700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 29599193-29600192 Glycine max
Glyma.02G177700 1.0kb downstream 1.0kb downstream 5150 true Chr02: 29594043-29599192 Glycine max
Glyma.02G177700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 29594043-29595042 Glycine max
Glyma.02G177700 2.0kb upstream 2.0kb upstream 6150 true Chr02: 29595043-29601192 Glycine max
Glyma.02G177700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 29599193-29601192 Glycine max
Glyma.02G177700 2.0kb downstream 2.0kb downstream 6150 true Chr02: 29593043-29599192 Glycine max
Glyma.02G177700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 29593043-29595042 Glycine max
Glyma.02G177700 5.0kb upstream 5.0kb upstream 9150 true Chr02: 29595043-29604192 Glycine max
Glyma.02G177700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 29599193-29604192 Glycine max
Glyma.02G177700 5.0kb downstream 5.0kb downstream 9150 true Chr02: 29590043-29599192 Glycine max
Glyma.02G177700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 29590043-29595042 Glycine max
Glyma.02G177700 10.0kb upstream 10.0kb upstream 14150 true Chr02: 29595043-29609192 Glycine max
Glyma.02G177700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 29599193-29609192 Glycine max
Glyma.02G177700 10.0kb downstream 10.0kb downstream 14150 true Chr02: 29585043-29599192 Glycine max
Glyma.02G177700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 29585043-29595042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779253 5273 Angiosperm View MSA
122241622 5265 Fabidae Singleton cluster - no MSA
124039005 5270 Rosid View MSA
123741549 5271 Pentapetalae View MSA
122770079 5272 Eudicot View MSA
121050927 5274 Embryophyte View MSA
123091036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049079 0.0 0.232717 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.230358 0.0 0.956943    
cufflinks 0.0105341 0.0 0.0666996 Low Low
cufflinks 0.177035 0.0 0.746579 Low  
cufflinks 0.0324075 0.0 0.160803 Low  
cufflinks 0.00776675 0.0 0.0554394 Low Low
cufflinks 0.239299 0.0 0.987562    
cufflinks 0.16427 0.0 0.696584 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.022     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain