Gene : Glyma.02G179100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  1791
Name:  ? Glyma.02G179100 Secondary Identifier:  ? PAC:30510835
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G179100 0.5kb upstream 0.5kb upstream 4659 true Chr02: 30380436-30385094 Glycine max
Glyma.02G179100 0.5kb upstream 0.5kb upstream 500 false Chr02: 30380436-30380935 Glycine max
Glyma.02G179100 0.5kb downstream 0.5kb downstream 4659 true Chr02: 30380936-30385594 Glycine max
Glyma.02G179100 0.5kb downstream 0.5kb downstream 500 false Chr02: 30385095-30385594 Glycine max
Glyma.02G179100 1.0kb upstream 1.0kb upstream 5159 true Chr02: 30379936-30385094 Glycine max
Glyma.02G179100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30379936-30380935 Glycine max
Glyma.02G179100 1.0kb downstream 1.0kb downstream 5159 true Chr02: 30380936-30386094 Glycine max
Glyma.02G179100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30385095-30386094 Glycine max
Glyma.02G179100 2.0kb upstream 2.0kb upstream 6159 true Chr02: 30378936-30385094 Glycine max
Glyma.02G179100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30378936-30380935 Glycine max
Glyma.02G179100 2.0kb downstream 2.0kb downstream 6159 true Chr02: 30380936-30387094 Glycine max
Glyma.02G179100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30385095-30387094 Glycine max
Glyma.02G179100 5.0kb upstream 5.0kb upstream 9159 true Chr02: 30375936-30385094 Glycine max
Glyma.02G179100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30375936-30380935 Glycine max
Glyma.02G179100 5.0kb downstream 5.0kb downstream 9159 true Chr02: 30380936-30390094 Glycine max
Glyma.02G179100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30385095-30390094 Glycine max
Glyma.02G179100 10.0kb upstream 10.0kb upstream 14159 true Chr02: 30370936-30385094 Glycine max
Glyma.02G179100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30370936-30380935 Glycine max
Glyma.02G179100 10.0kb downstream 10.0kb downstream 14159 true Chr02: 30380936-30395094 Glycine max
Glyma.02G179100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30385095-30395094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314721 5265 Fabidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.00632 0.0 17.611    
cufflinks 21.0496 0.0 56.1959 High  
cufflinks 8.4991 0.0 23.8033    
cufflinks 60.4258 0.0 169.237 High High
cufflinks 8.65438 0.0 24.3284    
cufflinks 4.53829 0.0 13.8025    
cufflinks 2.15412 0.0 7.2816   Low
cufflinks 21.4411 0.0 57.2306 High  
cufflinks 5.48865 0.0 16.2635    
cufflinks 12.182     High High
cufflinks 1.012        
cufflinks 5.558        
cufflinks 6.384        
cufflinks 4.337        
cufflinks 0.246       Low
cufflinks 2.283        
cufflinks 2.332        
cufflinks 12.289     High High
cufflinks 7.415       High
cufflinks 2.245        
cufflinks 1.565        
cufflinks 2.179        
cufflinks 1.96        
cufflinks 0.749       Low
cufflinks 2.038        
cufflinks 2.344        

0 Strain