Gene : Glyma.02G174800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  1748
Name:  ? Glyma.02G174800 Secondary Identifier:  ? PAC:30509409
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G174800 0.5kb upstream 0.5kb upstream 6995 true Chr02: 27996983-28003977 Glycine max
Glyma.02G174800 0.5kb upstream 0.5kb upstream 500 false Chr02: 28003478-28003977 Glycine max
Glyma.02G174800 0.5kb downstream 0.5kb downstream 6995 true Chr02: 27996483-28003477 Glycine max
Glyma.02G174800 0.5kb downstream 0.5kb downstream 500 false Chr02: 27996483-27996982 Glycine max
Glyma.02G174800 1.0kb upstream 1.0kb upstream 7495 true Chr02: 27996983-28004477 Glycine max
Glyma.02G174800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28003478-28004477 Glycine max
Glyma.02G174800 1.0kb downstream 1.0kb downstream 7495 true Chr02: 27995983-28003477 Glycine max
Glyma.02G174800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27995983-27996982 Glycine max
Glyma.02G174800 2.0kb upstream 2.0kb upstream 8495 true Chr02: 27996983-28005477 Glycine max
Glyma.02G174800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28003478-28005477 Glycine max
Glyma.02G174800 2.0kb downstream 2.0kb downstream 8495 true Chr02: 27994983-28003477 Glycine max
Glyma.02G174800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27994983-27996982 Glycine max
Glyma.02G174800 5.0kb upstream 5.0kb upstream 11495 true Chr02: 27996983-28008477 Glycine max
Glyma.02G174800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28003478-28008477 Glycine max
Glyma.02G174800 5.0kb downstream 5.0kb downstream 11495 true Chr02: 27991983-28003477 Glycine max
Glyma.02G174800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27991983-27996982 Glycine max
Glyma.02G174800 10.0kb upstream 10.0kb upstream 16495 true Chr02: 27996983-28013477 Glycine max
Glyma.02G174800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28003478-28013477 Glycine max
Glyma.02G174800 10.0kb downstream 10.0kb downstream 16495 true Chr02: 27986983-28003477 Glycine max
Glyma.02G174800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27986983-27996982 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296564 5265 Fabidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28864 0.0 14.8294   High
cufflinks 5.85315 0.0 16.286   High
cufflinks 2.56948 0.0 7.96417    
cufflinks 1.43073 0.0 4.77283   Low
cufflinks 2.57084 0.0 7.858    
cufflinks 3.35048 0.0 9.91926    
cufflinks 1.87774 0.0 6.03282    
cufflinks 2.11538 0.0 6.68974    
cufflinks 1.77413 0.0 5.75056    
cufflinks 1.232        
cufflinks 0.364       Low
cufflinks 1.156        
cufflinks 0.549        
cufflinks 0.407       Low
cufflinks 0.576        
cufflinks 5.232       High
cufflinks 0.302       Low
cufflinks 2.76        
cufflinks 1.9        
cufflinks 3.429       High
cufflinks 0.339       Low
cufflinks 3.573       High
cufflinks 2.002        
cufflinks 0.352       Low
cufflinks 2.614        
cufflinks 0.765        

0 Strain