Gene : Glyma.02G173300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13109 - NEUROCHONDRIN Genomic Order:  1733
Name:  ? Glyma.02G173300 Secondary Identifier:  ? PAC:30507881
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G173300 0.5kb upstream 0.5kb upstream 10752 true Chr02: 27573506-27584257 Glycine max
Glyma.02G173300 0.5kb upstream 0.5kb upstream 500 false Chr02: 27583758-27584257 Glycine max
Glyma.02G173300 0.5kb downstream 0.5kb downstream 10752 true Chr02: 27573006-27583757 Glycine max
Glyma.02G173300 0.5kb downstream 0.5kb downstream 500 false Chr02: 27573006-27573505 Glycine max
Glyma.02G173300 1.0kb upstream 1.0kb upstream 11252 true Chr02: 27573506-27584757 Glycine max
Glyma.02G173300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27583758-27584757 Glycine max
Glyma.02G173300 1.0kb downstream 1.0kb downstream 11252 true Chr02: 27572506-27583757 Glycine max
Glyma.02G173300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27572506-27573505 Glycine max
Glyma.02G173300 2.0kb upstream 2.0kb upstream 12252 true Chr02: 27573506-27585757 Glycine max
Glyma.02G173300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27583758-27585757 Glycine max
Glyma.02G173300 2.0kb downstream 2.0kb downstream 12252 true Chr02: 27571506-27583757 Glycine max
Glyma.02G173300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27571506-27573505 Glycine max
Glyma.02G173300 5.0kb upstream 5.0kb upstream 15252 true Chr02: 27573506-27588757 Glycine max
Glyma.02G173300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27583758-27588757 Glycine max
Glyma.02G173300 5.0kb downstream 5.0kb downstream 15252 true Chr02: 27568506-27583757 Glycine max
Glyma.02G173300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27568506-27573505 Glycine max
Glyma.02G173300 10.0kb upstream 10.0kb upstream 20252 true Chr02: 27573506-27593757 Glycine max
Glyma.02G173300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27583758-27593757 Glycine max
Glyma.02G173300 10.0kb downstream 10.0kb downstream 20252 true Chr02: 27563506-27583757 Glycine max
Glyma.02G173300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27563506-27573505 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302613 5265 Fabidae View MSA
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.33365 0.0 22.5675    
cufflinks 10.5406 0.0 28.2422    
cufflinks 10.178 0.0 27.2706    
cufflinks 11.1341 0.0 29.788    
cufflinks 9.6611 0.0 25.9885    
cufflinks 6.1171 0.0 16.9016   Low
cufflinks 23.4058 0.0 63.1688 High High
cufflinks 9.0703 0.0 24.4406    
cufflinks 11.0081 0.0 29.4626    
cufflinks 1.514        
cufflinks 0.466       Low
cufflinks 1.954        
cufflinks 1.78        
cufflinks 2.394       High
cufflinks 0.728       Low
cufflinks 1.778        
cufflinks 0.924        
cufflinks 2.119        
cufflinks 2.191        
cufflinks 2.312        
cufflinks 0.479       Low
cufflinks 2.127        
cufflinks 1.617        
cufflinks 0.571       Low
cufflinks 2.064        
cufflinks 0.757        

0 Strain