Gene : Glyma.02G174400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  1744
Name:  ? Glyma.02G174400 Secondary Identifier:  ? PAC:30506658
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G174400 0.5kb upstream 0.5kb upstream 1694 true Chr02: 27905469-27907162 Glycine max
Glyma.02G174400 0.5kb upstream 0.5kb upstream 500 false Chr02: 27906663-27907162 Glycine max
Glyma.02G174400 0.5kb downstream 0.5kb downstream 1694 true Chr02: 27904969-27906662 Glycine max
Glyma.02G174400 0.5kb downstream 0.5kb downstream 500 false Chr02: 27904969-27905468 Glycine max
Glyma.02G174400 1.0kb upstream 1.0kb upstream 2194 true Chr02: 27905469-27907662 Glycine max
Glyma.02G174400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27906663-27907662 Glycine max
Glyma.02G174400 1.0kb downstream 1.0kb downstream 2194 true Chr02: 27904469-27906662 Glycine max
Glyma.02G174400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27904469-27905468 Glycine max
Glyma.02G174400 2.0kb upstream 2.0kb upstream 3194 true Chr02: 27905469-27908662 Glycine max
Glyma.02G174400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27906663-27908662 Glycine max
Glyma.02G174400 2.0kb downstream 2.0kb downstream 3194 true Chr02: 27903469-27906662 Glycine max
Glyma.02G174400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27903469-27905468 Glycine max
Glyma.02G174400 5.0kb upstream 5.0kb upstream 6194 true Chr02: 27905469-27911662 Glycine max
Glyma.02G174400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27906663-27911662 Glycine max
Glyma.02G174400 5.0kb downstream 5.0kb downstream 6194 true Chr02: 27900469-27906662 Glycine max
Glyma.02G174400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27900469-27905468 Glycine max
Glyma.02G174400 10.0kb upstream 10.0kb upstream 11194 true Chr02: 27905469-27916662 Glycine max
Glyma.02G174400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27906663-27916662 Glycine max
Glyma.02G174400 10.0kb downstream 10.0kb downstream 11194 true Chr02: 27895469-27906662 Glycine max
Glyma.02G174400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27895469-27905468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312743 5265 Fabidae View MSA
124061504 5270 Rosid View MSA
123740259 5271 Pentapetalae View MSA
122791906 5272 Eudicot View MSA
122042658 5273 Angiosperm View MSA
121346631 5274 Embryophyte View MSA
123428408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7204 0.0 66.1243 High  
cufflinks 35.8817 0.0 95.7918 High  
cufflinks 16.4845 0.0 45.1055   Low
cufflinks 31.6857 0.0 84.5336 High  
cufflinks 54.0305 0.0 147.06 High High
cufflinks 40.303 0.0 107.979 High  
cufflinks 49.0479 0.0 132.423 High  
cufflinks 34.4323 0.0 91.8969 High  
cufflinks 42.8141 0.0 114.868 High  
cufflinks 11.225     High High
cufflinks 6.82     High  
cufflinks 7.213     High  
cufflinks 13.752     High High
cufflinks 15.846     High High
cufflinks 9.172     High  
cufflinks 7.509     High  
cufflinks 4.996       Low
cufflinks 8.512     High  
cufflinks 10.489     High  
cufflinks 5.572        
cufflinks 6.739     High  
cufflinks 5.634        
cufflinks 4.363       Low
cufflinks 7.216     High  
cufflinks 5.498        
cufflinks 7.463     High  

0 Strain