Gene : Glyma.02G185100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  1851
Name:  ? Glyma.02G185100 Secondary Identifier:  ? PAC:30509180
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4203 Glycine max pathologic  
Gmax PWY-5835 Glycine max pathologic  
Gmax PWY-6801 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G185100 0.5kb upstream 0.5kb upstream 2098 true Chr02: 32583649-32585746 Glycine max
Glyma.02G185100 0.5kb upstream 0.5kb upstream 500 false Chr02: 32585247-32585746 Glycine max
Glyma.02G185100 0.5kb downstream 0.5kb downstream 2098 true Chr02: 32583149-32585246 Glycine max
Glyma.02G185100 0.5kb downstream 0.5kb downstream 500 false Chr02: 32583149-32583648 Glycine max
Glyma.02G185100 1.0kb upstream 1.0kb upstream 2598 true Chr02: 32583649-32586246 Glycine max
Glyma.02G185100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32585247-32586246 Glycine max
Glyma.02G185100 1.0kb downstream 1.0kb downstream 2598 true Chr02: 32582649-32585246 Glycine max
Glyma.02G185100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32582649-32583648 Glycine max
Glyma.02G185100 2.0kb upstream 2.0kb upstream 3598 true Chr02: 32583649-32587246 Glycine max
Glyma.02G185100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32585247-32587246 Glycine max
Glyma.02G185100 2.0kb downstream 2.0kb downstream 3598 true Chr02: 32581649-32585246 Glycine max
Glyma.02G185100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32581649-32583648 Glycine max
Glyma.02G185100 5.0kb upstream 5.0kb upstream 6598 true Chr02: 32583649-32590246 Glycine max
Glyma.02G185100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32585247-32590246 Glycine max
Glyma.02G185100 5.0kb downstream 5.0kb downstream 6598 true Chr02: 32578649-32585246 Glycine max
Glyma.02G185100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32578649-32583648 Glycine max
Glyma.02G185100 10.0kb upstream 10.0kb upstream 11598 true Chr02: 32583649-32595246 Glycine max
Glyma.02G185100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32585247-32595246 Glycine max
Glyma.02G185100 10.0kb downstream 10.0kb downstream 11598 true Chr02: 32573649-32585246 Glycine max
Glyma.02G185100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32573649-32583648 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306898 5265 Fabidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466574 0.0 1.73497    
cufflinks 0.372647 0.0 1.39965    
cufflinks 23.3797 0.0 62.564 High High
cufflinks 0.60322 0.0 2.2111    
cufflinks 0.700753 0.0 2.55058    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0228395 0.0 0.0983674 Low Low
cufflinks 10.4978 0.0 28.4459   High
cufflinks 1.20873 0.0 4.22093    
cufflinks 3.267        
cufflinks 0.322        
cufflinks 13.505     High High
cufflinks 0.237        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.108        
cufflinks 0.656        
cufflinks 46.558     High High
cufflinks 0.199        
cufflinks 0.023     Low Low
cufflinks 0.771        
cufflinks 0.106        
cufflinks 0.287        
cufflinks 1.642        
cufflinks 0.03     Low Low
cufflinks 0.476        

0 Strain