Gene : Glyma.02G179900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24078:SF276 - CHAPERONE PROTEIN DNAJ 6 Genomic Order:  1799
Name:  ? Glyma.02G179900 Secondary Identifier:  ? PAC:30507174
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G179900 0.5kb upstream 0.5kb upstream 3848 true Chr02: 30631049-30634896 Glycine max
Glyma.02G179900 0.5kb upstream 0.5kb upstream 500 false Chr02: 30631049-30631548 Glycine max
Glyma.02G179900 0.5kb downstream 0.5kb downstream 3848 true Chr02: 30631549-30635396 Glycine max
Glyma.02G179900 0.5kb downstream 0.5kb downstream 500 false Chr02: 30634897-30635396 Glycine max
Glyma.02G179900 1.0kb upstream 1.0kb upstream 4348 true Chr02: 30630549-30634896 Glycine max
Glyma.02G179900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30630549-30631548 Glycine max
Glyma.02G179900 1.0kb downstream 1.0kb downstream 4348 true Chr02: 30631549-30635896 Glycine max
Glyma.02G179900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30634897-30635896 Glycine max
Glyma.02G179900 2.0kb upstream 2.0kb upstream 5348 true Chr02: 30629549-30634896 Glycine max
Glyma.02G179900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30629549-30631548 Glycine max
Glyma.02G179900 2.0kb downstream 2.0kb downstream 5348 true Chr02: 30631549-30636896 Glycine max
Glyma.02G179900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30634897-30636896 Glycine max
Glyma.02G179900 5.0kb upstream 5.0kb upstream 8348 true Chr02: 30626549-30634896 Glycine max
Glyma.02G179900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30626549-30631548 Glycine max
Glyma.02G179900 5.0kb downstream 5.0kb downstream 8348 true Chr02: 30631549-30639896 Glycine max
Glyma.02G179900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30634897-30639896 Glycine max
Glyma.02G179900 10.0kb upstream 10.0kb upstream 13348 true Chr02: 30621549-30634896 Glycine max
Glyma.02G179900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30621549-30631548 Glycine max
Glyma.02G179900 10.0kb downstream 10.0kb downstream 13348 true Chr02: 30631549-30644896 Glycine max
Glyma.02G179900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30634897-30644896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
122312138 5265 Fabidae View MSA
124061055 5270 Rosid View MSA
123736570 5271 Pentapetalae View MSA
122788654 5272 Eudicot View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.02616 0.0 12.2211    
cufflinks 10.1591 0.0 27.7549   High
cufflinks 3.28899 0.0 10.2067   Low
cufflinks 5.13373 0.0 15.0003    
cufflinks 4.19357 0.0 12.6674    
cufflinks 5.67072 0.0 16.4294    
cufflinks 4.12447 0.0 12.5009    
cufflinks 5.53339 0.0 16.0428    
cufflinks 5.71826 0.0 16.5491    
cufflinks 2.045        
cufflinks 1.551        
cufflinks 3.061        
cufflinks 4.227       High
cufflinks 4.195       High
cufflinks 1.153       Low
cufflinks 2.996        
cufflinks 0.974       Low
cufflinks 2.793        
cufflinks 4.933       High
cufflinks 2.422        
cufflinks 1.593        
cufflinks 3.117        
cufflinks 5.084       High
cufflinks 2.031        
cufflinks 2.947        
cufflinks 1.746        

0 Strain