Gene : Glyma.02G122900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31923:SF7 - BSD DOMAIN-CONTAINING PROTEIN Genomic Order:  1229
Name:  ? Glyma.02G122900 Secondary Identifier:  ? PAC:30506941
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G122900 0.5kb upstream 0.5kb upstream 5998 true Chr02: 12258963-12264960 Glycine max
Glyma.02G122900 0.5kb upstream 0.5kb upstream 500 false Chr02: 12258963-12259462 Glycine max
Glyma.02G122900 0.5kb downstream 0.5kb downstream 5998 true Chr02: 12259463-12265460 Glycine max
Glyma.02G122900 0.5kb downstream 0.5kb downstream 500 false Chr02: 12264961-12265460 Glycine max
Glyma.02G122900 1.0kb upstream 1.0kb upstream 6498 true Chr02: 12258463-12264960 Glycine max
Glyma.02G122900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12258463-12259462 Glycine max
Glyma.02G122900 1.0kb downstream 1.0kb downstream 6498 true Chr02: 12259463-12265960 Glycine max
Glyma.02G122900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12264961-12265960 Glycine max
Glyma.02G122900 2.0kb upstream 2.0kb upstream 7498 true Chr02: 12257463-12264960 Glycine max
Glyma.02G122900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12257463-12259462 Glycine max
Glyma.02G122900 2.0kb downstream 2.0kb downstream 7498 true Chr02: 12259463-12266960 Glycine max
Glyma.02G122900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12264961-12266960 Glycine max
Glyma.02G122900 5.0kb upstream 5.0kb upstream 10498 true Chr02: 12254463-12264960 Glycine max
Glyma.02G122900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12254463-12259462 Glycine max
Glyma.02G122900 5.0kb downstream 5.0kb downstream 10498 true Chr02: 12259463-12269960 Glycine max
Glyma.02G122900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12264961-12269960 Glycine max
Glyma.02G122900 10.0kb upstream 10.0kb upstream 15498 true Chr02: 12249463-12264960 Glycine max
Glyma.02G122900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12249463-12259462 Glycine max
Glyma.02G122900 10.0kb downstream 10.0kb downstream 15498 true Chr02: 12259463-12274960 Glycine max
Glyma.02G122900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12264961-12274960 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304972 5265 Fabidae View MSA
124072325 5270 Rosid View MSA
123741751 5271 Pentapetalae View MSA
122788146 5272 Eudicot View MSA
122043201 5273 Angiosperm View MSA
121345740 5274 Embryophyte View MSA
123425490 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3188 0.0 43.6855    
cufflinks 13.4215 0.0 36.1988    
cufflinks 8.73742 0.0 24.3196   Low
cufflinks 17.589 0.0 47.0104    
cufflinks 15.796 0.0 42.2921    
cufflinks 15.5403 0.0 41.6542    
cufflinks 17.3298 0.0 46.334    
cufflinks 18.227 0.0 48.6751    
cufflinks 11.0122 0.0 30.0028   Low
cufflinks 3.667        
cufflinks 7.833     High High
cufflinks 2.049       Low
cufflinks 3.214        
cufflinks 3.539        
cufflinks 5.866     High High
cufflinks 3.834        
cufflinks 2.622       Low
cufflinks 3.313        
cufflinks 3.562        
cufflinks 3.506        
cufflinks 6.281     High High
cufflinks 3.577        
cufflinks 3.324        
cufflinks 7.368     High High
cufflinks 3.374        
cufflinks 5.436        

0 Strain