Gene : Glyma.19G016300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Genomic Order:  163
Name:  ? Glyma.19G016300 Secondary Identifier:  ? PAC:30513072
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G016300 0.5kb upstream 0.5kb upstream 10746 true Chr19: 1611333-1622078 Glycine max
Glyma.19G016300 0.5kb upstream 0.5kb upstream 500 false Chr19: 1621579-1622078 Glycine max
Glyma.19G016300 0.5kb downstream 0.5kb downstream 10746 true Chr19: 1610833-1621578 Glycine max
Glyma.19G016300 0.5kb downstream 0.5kb downstream 500 false Chr19: 1610833-1611332 Glycine max
Glyma.19G016300 1.0kb upstream 1.0kb upstream 11246 true Chr19: 1611333-1622578 Glycine max
Glyma.19G016300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1621579-1622578 Glycine max
Glyma.19G016300 1.0kb downstream 1.0kb downstream 11246 true Chr19: 1610333-1621578 Glycine max
Glyma.19G016300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1610333-1611332 Glycine max
Glyma.19G016300 2.0kb upstream 2.0kb upstream 12246 true Chr19: 1611333-1623578 Glycine max
Glyma.19G016300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1621579-1623578 Glycine max
Glyma.19G016300 2.0kb downstream 2.0kb downstream 12246 true Chr19: 1609333-1621578 Glycine max
Glyma.19G016300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1609333-1611332 Glycine max
Glyma.19G016300 5.0kb upstream 5.0kb upstream 15246 true Chr19: 1611333-1626578 Glycine max
Glyma.19G016300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1621579-1626578 Glycine max
Glyma.19G016300 5.0kb downstream 5.0kb downstream 15246 true Chr19: 1606333-1621578 Glycine max
Glyma.19G016300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1606333-1611332 Glycine max
Glyma.19G016300 10.0kb upstream 10.0kb upstream 20246 true Chr19: 1611333-1631578 Glycine max
Glyma.19G016300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1621579-1631578 Glycine max
Glyma.19G016300 10.0kb downstream 10.0kb downstream 20246 true Chr19: 1601333-1621578 Glycine max
Glyma.19G016300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1601333-1611332 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308995 5265 Fabidae View MSA
124072493 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6598 0.0 42.9268    
cufflinks 10.661 0.0 38.5249    
cufflinks 19.6817 0.0 82.7719   High
cufflinks 10.1234 0.0 36.3905    
cufflinks 7.39385 0.0 25.6272   Low
cufflinks 9.39342 0.0 33.1913    
cufflinks 13.0287 0.0 48.6922    
cufflinks 9.08657 0.0 32.4652    
cufflinks 9.06239 0.0 32.2063    
cufflinks 3.481        
cufflinks 19.804     High High
cufflinks 6.193        
cufflinks 3.161       Low
cufflinks 2.704       Low
cufflinks 21.329     High High
cufflinks 4.829        
cufflinks 4.86        
cufflinks 5.697        
cufflinks 5.571        
cufflinks 4.637        
cufflinks 23.873     High High
cufflinks 5.011        
cufflinks 4.667        
cufflinks 12.414     High  
cufflinks 4.538        
cufflinks 16.783     High High

0 Strain