Gene : Glyma.02G131500 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  1315
Name:  ? Glyma.02G131500 Secondary Identifier:  ? PAC:30508879
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LEU-DEG2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G131500 0.5kb upstream 0.5kb upstream 6426 true Chr02: 13570993-13577418 Glycine max
Glyma.02G131500 0.5kb upstream 0.5kb upstream 500 false Chr02: 13576919-13577418 Glycine max
Glyma.02G131500 0.5kb downstream 0.5kb downstream 6426 true Chr02: 13570493-13576918 Glycine max
Glyma.02G131500 0.5kb downstream 0.5kb downstream 500 false Chr02: 13570493-13570992 Glycine max
Glyma.02G131500 1.0kb upstream 1.0kb upstream 6926 true Chr02: 13570993-13577918 Glycine max
Glyma.02G131500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13576919-13577918 Glycine max
Glyma.02G131500 1.0kb downstream 1.0kb downstream 6926 true Chr02: 13569993-13576918 Glycine max
Glyma.02G131500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13569993-13570992 Glycine max
Glyma.02G131500 2.0kb upstream 2.0kb upstream 7926 true Chr02: 13570993-13578918 Glycine max
Glyma.02G131500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13576919-13578918 Glycine max
Glyma.02G131500 2.0kb downstream 2.0kb downstream 7926 true Chr02: 13568993-13576918 Glycine max
Glyma.02G131500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13568993-13570992 Glycine max
Glyma.02G131500 5.0kb upstream 5.0kb upstream 10926 true Chr02: 13570993-13581918 Glycine max
Glyma.02G131500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13576919-13581918 Glycine max
Glyma.02G131500 5.0kb downstream 5.0kb downstream 10926 true Chr02: 13565993-13576918 Glycine max
Glyma.02G131500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13565993-13570992 Glycine max
Glyma.02G131500 10.0kb upstream 10.0kb upstream 15926 true Chr02: 13570993-13586918 Glycine max
Glyma.02G131500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13576919-13586918 Glycine max
Glyma.02G131500 10.0kb downstream 10.0kb downstream 15926 true Chr02: 13560993-13576918 Glycine max
Glyma.02G131500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13560993-13570992 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303334 5265 Fabidae View MSA
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4467 0.0 42.5688    
cufflinks 3.92935 0.0 15.1931    
cufflinks 49.4314 0.0 196.051 High High
cufflinks 4.18524 0.0 15.7924    
cufflinks 5.25688 0.0 19.0889    
cufflinks 10.0861 0.0 34.4717    
cufflinks 3.3012 0.0 13.2996    
cufflinks 3.37523 0.0 13.4982    
cufflinks 8.38752 0.0 28.8158    
cufflinks 0.66       Low
cufflinks 15.954     High High
cufflinks 6.557        
cufflinks 1.133       Low
cufflinks 1.795        
cufflinks 15.263     High High
cufflinks 6.147        
cufflinks 0.761       Low
cufflinks 1.412        
cufflinks 1.243        
cufflinks 10.766     High  
cufflinks 8.725     High  
cufflinks 4.217        
cufflinks 1.244        
cufflinks 10.402     High  
cufflinks 9.806     High  
cufflinks 3.347        

0 Strain