Gene : Glyma.02G132100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32439:SF0 - FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC Genomic Order:  1321
Name:  ? Glyma.02G132100 Secondary Identifier:  ? PAC:30507256
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-381 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G132100 0.5kb upstream 0.5kb upstream 4095 true Chr02: 13635257-13639351 Glycine max
Glyma.02G132100 0.5kb upstream 0.5kb upstream 500 false Chr02: 13635257-13635756 Glycine max
Glyma.02G132100 0.5kb downstream 0.5kb downstream 4095 true Chr02: 13635757-13639851 Glycine max
Glyma.02G132100 0.5kb downstream 0.5kb downstream 500 false Chr02: 13639352-13639851 Glycine max
Glyma.02G132100 1.0kb upstream 1.0kb upstream 4595 true Chr02: 13634757-13639351 Glycine max
Glyma.02G132100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13634757-13635756 Glycine max
Glyma.02G132100 1.0kb downstream 1.0kb downstream 4595 true Chr02: 13635757-13640351 Glycine max
Glyma.02G132100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13639352-13640351 Glycine max
Glyma.02G132100 2.0kb upstream 2.0kb upstream 5595 true Chr02: 13633757-13639351 Glycine max
Glyma.02G132100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13633757-13635756 Glycine max
Glyma.02G132100 2.0kb downstream 2.0kb downstream 5595 true Chr02: 13635757-13641351 Glycine max
Glyma.02G132100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13639352-13641351 Glycine max
Glyma.02G132100 5.0kb upstream 5.0kb upstream 8595 true Chr02: 13630757-13639351 Glycine max
Glyma.02G132100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13630757-13635756 Glycine max
Glyma.02G132100 5.0kb downstream 5.0kb downstream 8595 true Chr02: 13635757-13644351 Glycine max
Glyma.02G132100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13639352-13644351 Glycine max
Glyma.02G132100 10.0kb upstream 10.0kb upstream 13595 true Chr02: 13625757-13639351 Glycine max
Glyma.02G132100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13625757-13635756 Glycine max
Glyma.02G132100 10.0kb downstream 10.0kb downstream 13595 true Chr02: 13635757-13649351 Glycine max
Glyma.02G132100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13639352-13649351 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300952 5265 Fabidae View MSA
124060764 5270 Rosid View MSA
123739378 5271 Pentapetalae View MSA
122787836 5272 Eudicot View MSA
122043925 5273 Angiosperm View MSA
123428980 5275 Viridiplantae View MSA
121346726 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.06999 0.0 19.1069   High
cufflinks 3.09053 0.0 9.01879    
cufflinks 1.33489 0.0 4.36459    
cufflinks 0.261031 0.0 0.975244   Low
cufflinks 7.56749 0.0 20.3951   High
cufflinks 1.10374 0.0 3.71093    
cufflinks 0.827041 0.0 2.86646    
cufflinks 2.9391 0.0 8.60513    
cufflinks 5.1502 0.0 14.2133    
cufflinks 4.914        
cufflinks 0.148       Low
cufflinks 6.889        
cufflinks 0.446        
cufflinks 0.749        
cufflinks 3.442        
cufflinks 21.905     High High
cufflinks 1.718        
cufflinks 4.074        
cufflinks 2.119        
cufflinks 0.272       Low
cufflinks 0.123       Low
cufflinks 0.886        
cufflinks 13.891     High High
cufflinks 0.16       Low
cufflinks 0.528        
cufflinks 4.835        

0 Strain