Gene : Glyma.02G137100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13237:SF8 - SOMETHING ABOUT SILENCING PROTEIN 10 Genomic Order:  1371
Name:  ? Glyma.02G137100 Secondary Identifier:  ? PAC:30510931
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G137100 0.5kb upstream 0.5kb upstream 6238 true Chr02: 14181268-14187505 Glycine max
Glyma.02G137100 0.5kb upstream 0.5kb upstream 500 false Chr02: 14181268-14181767 Glycine max
Glyma.02G137100 0.5kb downstream 0.5kb downstream 6238 true Chr02: 14181768-14188005 Glycine max
Glyma.02G137100 0.5kb downstream 0.5kb downstream 500 false Chr02: 14187506-14188005 Glycine max
Glyma.02G137100 1.0kb upstream 1.0kb upstream 6738 true Chr02: 14180768-14187505 Glycine max
Glyma.02G137100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14180768-14181767 Glycine max
Glyma.02G137100 1.0kb downstream 1.0kb downstream 6738 true Chr02: 14181768-14188505 Glycine max
Glyma.02G137100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14187506-14188505 Glycine max
Glyma.02G137100 2.0kb upstream 2.0kb upstream 7738 true Chr02: 14179768-14187505 Glycine max
Glyma.02G137100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14179768-14181767 Glycine max
Glyma.02G137100 2.0kb downstream 2.0kb downstream 7738 true Chr02: 14181768-14189505 Glycine max
Glyma.02G137100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14187506-14189505 Glycine max
Glyma.02G137100 5.0kb upstream 5.0kb upstream 10738 true Chr02: 14176768-14187505 Glycine max
Glyma.02G137100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14176768-14181767 Glycine max
Glyma.02G137100 5.0kb downstream 5.0kb downstream 10738 true Chr02: 14181768-14192505 Glycine max
Glyma.02G137100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14187506-14192505 Glycine max
Glyma.02G137100 10.0kb upstream 10.0kb upstream 15738 true Chr02: 14171768-14187505 Glycine max
Glyma.02G137100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14171768-14181767 Glycine max
Glyma.02G137100 10.0kb downstream 10.0kb downstream 15738 true Chr02: 14181768-14197505 Glycine max
Glyma.02G137100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14187506-14197505 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122303276 5265 Fabidae View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7279 0.0 48.8987   High
cufflinks 8.31038 0.0 30.0175    
cufflinks 6.87604 0.0 25.0197    
cufflinks 7.34023 0.0 27.2393    
cufflinks 10.2129 0.0 37.0724    
cufflinks 5.58272 0.0 18.2891   Low
cufflinks 6.53258 0.0 24.1696    
cufflinks 8.15043 0.0 30.0117    
cufflinks 7.37058 0.0 26.5587    
cufflinks 2.917        
cufflinks 1.846       Low
cufflinks 2.922        
cufflinks 4.2       High
cufflinks 5.712       High
cufflinks 1.929       Low
cufflinks 2.829        
cufflinks 1.734       Low
cufflinks 3.024        
cufflinks 3.432        
cufflinks 3.581        
cufflinks 1.848       Low
cufflinks 3.188        
cufflinks 2.815        
cufflinks 1.95       Low
cufflinks 3.371        
cufflinks 2.194        

0 Strain