Gene : Glyma.02G134400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  1344
Name:  ? Glyma.02G134400 Secondary Identifier:  ? PAC:30507962
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G134400 0.5kb upstream 0.5kb upstream 5143 true Chr02: 13894892-13900034 Glycine max
Glyma.02G134400 0.5kb upstream 0.5kb upstream 500 false Chr02: 13894892-13895391 Glycine max
Glyma.02G134400 0.5kb downstream 0.5kb downstream 5143 true Chr02: 13895392-13900534 Glycine max
Glyma.02G134400 0.5kb downstream 0.5kb downstream 500 false Chr02: 13900035-13900534 Glycine max
Glyma.02G134400 1.0kb upstream 1.0kb upstream 5643 true Chr02: 13894392-13900034 Glycine max
Glyma.02G134400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13894392-13895391 Glycine max
Glyma.02G134400 1.0kb downstream 1.0kb downstream 5643 true Chr02: 13895392-13901034 Glycine max
Glyma.02G134400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13900035-13901034 Glycine max
Glyma.02G134400 2.0kb upstream 2.0kb upstream 6643 true Chr02: 13893392-13900034 Glycine max
Glyma.02G134400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13893392-13895391 Glycine max
Glyma.02G134400 2.0kb downstream 2.0kb downstream 6643 true Chr02: 13895392-13902034 Glycine max
Glyma.02G134400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13900035-13902034 Glycine max
Glyma.02G134400 5.0kb upstream 5.0kb upstream 9643 true Chr02: 13890392-13900034 Glycine max
Glyma.02G134400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13890392-13895391 Glycine max
Glyma.02G134400 5.0kb downstream 5.0kb downstream 9643 true Chr02: 13895392-13905034 Glycine max
Glyma.02G134400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13900035-13905034 Glycine max
Glyma.02G134400 10.0kb upstream 10.0kb upstream 14643 true Chr02: 13885392-13900034 Glycine max
Glyma.02G134400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13885392-13895391 Glycine max
Glyma.02G134400 10.0kb downstream 10.0kb downstream 14643 true Chr02: 13895392-13910034 Glycine max
Glyma.02G134400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13900035-13910034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305826 5265 Fabidae View MSA
124065696 5270 Rosid View MSA
123744612 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 176.636 0.0 632.53 High High
cufflinks 78.7453 0.0 237.134 High  
cufflinks 31.427 0.0 85.3942 High Low
cufflinks 89.1374 0.0 274.521 High  
cufflinks 117.937 0.0 385.457 High  
cufflinks 39.6174 0.0 109.845 High Low
cufflinks 194.525 0.0 715.171 High High
cufflinks 68.317 0.0 201.621 High  
cufflinks 62.4769 0.0 182.457 High  
cufflinks 26.064     High  
cufflinks 70.206     High High
cufflinks 16.395     High Low
cufflinks 32.281     High  
cufflinks 52.119     High  
cufflinks 28.967     High  
cufflinks 22.572     High  
cufflinks 52.697     High  
cufflinks 24.44     High  
cufflinks 31.905     High  
cufflinks 23.796     High  
cufflinks 109.19     High High
cufflinks 23.427     High  
cufflinks 16.169     High Low
cufflinks 76.122     High High
cufflinks 20.649     High  
cufflinks 63.758     High High

0 Strain