Gene : Glyma.19G018600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  186
Name:  ? Glyma.19G018600 Secondary Identifier:  ? PAC:30513177
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G018600 0.5kb upstream 0.5kb upstream 2623 true Chr19: 1925141-1927763 Glycine max
Glyma.19G018600 0.5kb upstream 0.5kb upstream 500 false Chr19: 1925141-1925640 Glycine max
Glyma.19G018600 0.5kb downstream 0.5kb downstream 2623 true Chr19: 1925641-1928263 Glycine max
Glyma.19G018600 0.5kb downstream 0.5kb downstream 500 false Chr19: 1927764-1928263 Glycine max
Glyma.19G018600 1.0kb upstream 1.0kb upstream 3123 true Chr19: 1924641-1927763 Glycine max
Glyma.19G018600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1924641-1925640 Glycine max
Glyma.19G018600 1.0kb downstream 1.0kb downstream 3123 true Chr19: 1925641-1928763 Glycine max
Glyma.19G018600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1927764-1928763 Glycine max
Glyma.19G018600 2.0kb upstream 2.0kb upstream 4123 true Chr19: 1923641-1927763 Glycine max
Glyma.19G018600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1923641-1925640 Glycine max
Glyma.19G018600 2.0kb downstream 2.0kb downstream 4123 true Chr19: 1925641-1929763 Glycine max
Glyma.19G018600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1927764-1929763 Glycine max
Glyma.19G018600 5.0kb upstream 5.0kb upstream 7123 true Chr19: 1920641-1927763 Glycine max
Glyma.19G018600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1920641-1925640 Glycine max
Glyma.19G018600 5.0kb downstream 5.0kb downstream 7123 true Chr19: 1925641-1932763 Glycine max
Glyma.19G018600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1927764-1932763 Glycine max
Glyma.19G018600 10.0kb upstream 10.0kb upstream 12123 true Chr19: 1915641-1927763 Glycine max
Glyma.19G018600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1915641-1925640 Glycine max
Glyma.19G018600 10.0kb downstream 10.0kb downstream 12123 true Chr19: 1925641-1937763 Glycine max
Glyma.19G018600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1927764-1937763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122306441 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.0323 0.0 236.456 High High
cufflinks 1.77741 0.0 5.67288   Low
cufflinks 56.0201 0.0 169.236 High High
cufflinks 1.73817 0.0 5.54172   Low
cufflinks 12.1102 0.0 32.3181    
cufflinks 39.2697 0.0 111.9 High  
cufflinks 4.57495 0.0 12.8908    
cufflinks 7.15209 0.0 19.3903    
cufflinks 11.6431 0.0 31.0805    
cufflinks 24.047     High  
cufflinks 203.055     High High
cufflinks 57.989     High  
cufflinks 42.942     High  
cufflinks 34.529     High  
cufflinks 46.845     High  
cufflinks 9.465     High Low
cufflinks 77.25     High  
cufflinks 20.031     High  
cufflinks 6.226       Low
cufflinks 6.64       Low
cufflinks 92.515     High  
cufflinks 17.79     High  
cufflinks 18.342     High  
cufflinks 253.281     High High
cufflinks 6.165       Low
cufflinks 158.992     High High

0 Strain