Gene : Glyma.02G140000 G. max Wm82.a2.v1
Defline:  (1 of 106) PTHR12411 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  1400
Name:  ? Glyma.02G140000 Secondary Identifier:  ? PAC:30507378
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G140000 0.5kb upstream 0.5kb upstream 1763 true Chr02: 14520395-14522157 Glycine max
Glyma.02G140000 0.5kb upstream 0.5kb upstream 500 false Chr02: 14520395-14520894 Glycine max
Glyma.02G140000 0.5kb downstream 0.5kb downstream 1763 true Chr02: 14520895-14522657 Glycine max
Glyma.02G140000 0.5kb downstream 0.5kb downstream 500 false Chr02: 14522158-14522657 Glycine max
Glyma.02G140000 1.0kb upstream 1.0kb upstream 2263 true Chr02: 14519895-14522157 Glycine max
Glyma.02G140000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14519895-14520894 Glycine max
Glyma.02G140000 1.0kb downstream 1.0kb downstream 2263 true Chr02: 14520895-14523157 Glycine max
Glyma.02G140000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14522158-14523157 Glycine max
Glyma.02G140000 2.0kb upstream 2.0kb upstream 3263 true Chr02: 14518895-14522157 Glycine max
Glyma.02G140000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14518895-14520894 Glycine max
Glyma.02G140000 2.0kb downstream 2.0kb downstream 3263 true Chr02: 14520895-14524157 Glycine max
Glyma.02G140000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14522158-14524157 Glycine max
Glyma.02G140000 5.0kb upstream 5.0kb upstream 6263 true Chr02: 14515895-14522157 Glycine max
Glyma.02G140000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14515895-14520894 Glycine max
Glyma.02G140000 5.0kb downstream 5.0kb downstream 6263 true Chr02: 14520895-14527157 Glycine max
Glyma.02G140000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14522158-14527157 Glycine max
Glyma.02G140000 10.0kb upstream 10.0kb upstream 11263 true Chr02: 14510895-14522157 Glycine max
Glyma.02G140000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14510895-14520894 Glycine max
Glyma.02G140000 10.0kb downstream 10.0kb downstream 11263 true Chr02: 14520895-14532157 Glycine max
Glyma.02G140000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14522158-14532157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
122316135 5265 Fabidae View MSA
124051561 5270 Rosid View MSA
123753893 5271 Pentapetalae View MSA
122775321 5272 Eudicot View MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0355354 0.0 0.161154 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.123       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain