Gene : Glyma.02G146400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33057:SF21 - OVATE FAMILY PROTEIN 11-RELATED Genomic Order:  1464
Name:  ? Glyma.02G146400 Secondary Identifier:  ? PAC:30511054
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G146400 0.5kb upstream 0.5kb upstream 1115 true Chr02: 15112386-15113500 Glycine max
Glyma.02G146400 0.5kb upstream 0.5kb upstream 500 false Chr02: 15112386-15112885 Glycine max
Glyma.02G146400 0.5kb downstream 0.5kb downstream 1115 true Chr02: 15112886-15114000 Glycine max
Glyma.02G146400 0.5kb downstream 0.5kb downstream 500 false Chr02: 15113501-15114000 Glycine max
Glyma.02G146400 1.0kb upstream 1.0kb upstream 1615 true Chr02: 15111886-15113500 Glycine max
Glyma.02G146400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15111886-15112885 Glycine max
Glyma.02G146400 1.0kb downstream 1.0kb downstream 1615 true Chr02: 15112886-15114500 Glycine max
Glyma.02G146400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15113501-15114500 Glycine max
Glyma.02G146400 2.0kb upstream 2.0kb upstream 2615 true Chr02: 15110886-15113500 Glycine max
Glyma.02G146400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15110886-15112885 Glycine max
Glyma.02G146400 2.0kb downstream 2.0kb downstream 2615 true Chr02: 15112886-15115500 Glycine max
Glyma.02G146400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15113501-15115500 Glycine max
Glyma.02G146400 5.0kb upstream 5.0kb upstream 5615 true Chr02: 15107886-15113500 Glycine max
Glyma.02G146400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15107886-15112885 Glycine max
Glyma.02G146400 5.0kb downstream 5.0kb downstream 5615 true Chr02: 15112886-15118500 Glycine max
Glyma.02G146400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15113501-15118500 Glycine max
Glyma.02G146400 10.0kb upstream 10.0kb upstream 10615 true Chr02: 15102886-15113500 Glycine max
Glyma.02G146400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15102886-15112885 Glycine max
Glyma.02G146400 10.0kb downstream 10.0kb downstream 10615 true Chr02: 15112886-15123500 Glycine max
Glyma.02G146400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15113501-15123500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312940 5265 Fabidae View MSA
124065353 5270 Rosid View MSA
123736628 5271 Pentapetalae View MSA
122795583 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045862 0.0 0.207412 Low Low
cufflinks 3.80801 0.0 13.4512    
cufflinks 1.35747 0.0 5.10883    
cufflinks 3.58114 0.0 12.7009    
cufflinks 4.34861 0.0 15.1493    
cufflinks 2.30878 0.0 8.4337    
cufflinks 2.28612 0.0 8.34631    
cufflinks 2.21105 0.0 8.08313    
cufflinks 1.86001 0.0 6.87152    
cufflinks 0.292        
cufflinks 1.187        
cufflinks 1.64        
cufflinks 5.832       High
cufflinks 6.219       High
cufflinks 2.021        
cufflinks 0.06     Low Low
cufflinks 0.584        
cufflinks 4.992       High
cufflinks 5.756       High
cufflinks 0.084     Low Low
cufflinks 2.896        
cufflinks 0.115       Low
cufflinks 0.142        
cufflinks 1.248        
cufflinks 0.047     Low Low
cufflinks 1.846        

0 Strain