Gene : Glyma.02G143600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11730//PTHR11730:SF52 - AMMONIUM TRANSPORTER Genomic Order:  1436
Name:  ? Glyma.02G143600 Secondary Identifier:  ? PAC:30510592
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G143600 0.5kb upstream 0.5kb upstream 3213 true Chr02: 14821658-14824870 Glycine max
Glyma.02G143600 0.5kb upstream 0.5kb upstream 500 false Chr02: 14824371-14824870 Glycine max
Glyma.02G143600 0.5kb downstream 0.5kb downstream 3213 true Chr02: 14821158-14824370 Glycine max
Glyma.02G143600 0.5kb downstream 0.5kb downstream 500 false Chr02: 14821158-14821657 Glycine max
Glyma.02G143600 1.0kb upstream 1.0kb upstream 3713 true Chr02: 14821658-14825370 Glycine max
Glyma.02G143600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14824371-14825370 Glycine max
Glyma.02G143600 1.0kb downstream 1.0kb downstream 3713 true Chr02: 14820658-14824370 Glycine max
Glyma.02G143600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14820658-14821657 Glycine max
Glyma.02G143600 2.0kb upstream 2.0kb upstream 4713 true Chr02: 14821658-14826370 Glycine max
Glyma.02G143600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14824371-14826370 Glycine max
Glyma.02G143600 2.0kb downstream 2.0kb downstream 4713 true Chr02: 14819658-14824370 Glycine max
Glyma.02G143600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14819658-14821657 Glycine max
Glyma.02G143600 5.0kb upstream 5.0kb upstream 7713 true Chr02: 14821658-14829370 Glycine max
Glyma.02G143600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14824371-14829370 Glycine max
Glyma.02G143600 5.0kb downstream 5.0kb downstream 7713 true Chr02: 14816658-14824370 Glycine max
Glyma.02G143600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14816658-14821657 Glycine max
Glyma.02G143600 10.0kb upstream 10.0kb upstream 12713 true Chr02: 14821658-14834370 Glycine max
Glyma.02G143600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14824371-14834370 Glycine max
Glyma.02G143600 10.0kb downstream 10.0kb downstream 12713 true Chr02: 14811658-14824370 Glycine max
Glyma.02G143600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14811658-14821657 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306237 5265 Fabidae View MSA
124070056 5270 Rosid View MSA
123744149 5271 Pentapetalae View MSA
122795820 5272 Eudicot View MSA
122048478 5273 Angiosperm View MSA
121310983 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.8425 0.0 44.1372   High
cufflinks 1.80161 0.0 8.59164    
cufflinks 0.0123123 0.0 0.0642751 Low Low
cufflinks 0.582165 0.0 2.63873    
cufflinks 1.38256 0.0 7.04075    
cufflinks 0.00980631 0.0 0.0518569 Low Low
cufflinks 0.28874 0.0 1.44577    
cufflinks 1.56167 0.0 7.91652    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 1.294       High
cufflinks 0.069     Low  
cufflinks 0.023     Low  
cufflinks 0.062        
cufflinks 0.043     Low  
cufflinks 0.092        
cufflinks 0.233        
cufflinks 6.298       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.006     Low Low
cufflinks 0.04     Low  
cufflinks 0.017     Low  
cufflinks 0.004     Low Low
cufflinks 0.048     Low  

0 Strain