Gene : Glyma.02G099200 G. max Wm82.a2.v1
Defline:  (1 of 6) PF06351 - Allene oxide cyclase (Allene_ox_cyc) Genomic Order:  992
Name:  ? Glyma.02G099200 Secondary Identifier:  ? PAC:30507119
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-735 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G099200 0.5kb upstream 0.5kb upstream 2098 true Chr02: 9257064-9259161 Glycine max
Glyma.02G099200 0.5kb upstream 0.5kb upstream 500 false Chr02: 9258662-9259161 Glycine max
Glyma.02G099200 0.5kb downstream 0.5kb downstream 2098 true Chr02: 9256564-9258661 Glycine max
Glyma.02G099200 0.5kb downstream 0.5kb downstream 500 false Chr02: 9256564-9257063 Glycine max
Glyma.02G099200 1.0kb upstream 1.0kb upstream 2598 true Chr02: 9257064-9259661 Glycine max
Glyma.02G099200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9258662-9259661 Glycine max
Glyma.02G099200 1.0kb downstream 1.0kb downstream 2598 true Chr02: 9256064-9258661 Glycine max
Glyma.02G099200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9256064-9257063 Glycine max
Glyma.02G099200 2.0kb upstream 2.0kb upstream 3598 true Chr02: 9257064-9260661 Glycine max
Glyma.02G099200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9258662-9260661 Glycine max
Glyma.02G099200 2.0kb downstream 2.0kb downstream 3598 true Chr02: 9255064-9258661 Glycine max
Glyma.02G099200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9255064-9257063 Glycine max
Glyma.02G099200 5.0kb upstream 5.0kb upstream 6598 true Chr02: 9257064-9263661 Glycine max
Glyma.02G099200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9258662-9263661 Glycine max
Glyma.02G099200 5.0kb downstream 5.0kb downstream 6598 true Chr02: 9252064-9258661 Glycine max
Glyma.02G099200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9252064-9257063 Glycine max
Glyma.02G099200 10.0kb upstream 10.0kb upstream 11598 true Chr02: 9257064-9268661 Glycine max
Glyma.02G099200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9258662-9268661 Glycine max
Glyma.02G099200 10.0kb downstream 10.0kb downstream 11598 true Chr02: 9247064-9258661 Glycine max
Glyma.02G099200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9247064-9257063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305764 5265 Fabidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1444 0.0 31.63    
cufflinks 17.4499 0.0 47.5428    
cufflinks 18.0784 0.0 49.1179    
cufflinks 8.3017 0.0 24.3393   Low
cufflinks 24.559 0.0 65.8499 High  
cufflinks 8.87927 0.0 25.8628    
cufflinks 8.11149 0.0 23.9325   Low
cufflinks 36.8506 0.0 98.4105 High High
cufflinks 17.9285 0.0 48.7332    
cufflinks 11.335     High  
cufflinks 27.776     High  
cufflinks 13.912     High  
cufflinks 5.332        
cufflinks 3.126        
cufflinks 7.937     High  
cufflinks 1.4       Low
cufflinks 81.108     High High
cufflinks 18.647     High  
cufflinks 6.089        
cufflinks 1.185       Low
cufflinks 31.963     High  
cufflinks 1.018       Low
cufflinks 2.958        
cufflinks 59.861     High High
cufflinks 1.041       Low
cufflinks 72.46     High High

0 Strain