Gene : Glyma.19G009100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10996//PTHR10996:SF171 - 2-HYDROXYACID DEHYDROGENASE-RELATED Genomic Order:  91
Name:  ? Glyma.19G009100 Secondary Identifier:  ? PAC:30511746
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G009100 0.5kb upstream 0.5kb upstream 4315 true Chr19: 866083-870397 Glycine max
Glyma.19G009100 0.5kb upstream 0.5kb upstream 500 false Chr19: 866083-866582 Glycine max
Glyma.19G009100 0.5kb downstream 0.5kb downstream 4315 true Chr19: 866583-870897 Glycine max
Glyma.19G009100 0.5kb downstream 0.5kb downstream 500 false Chr19: 870398-870897 Glycine max
Glyma.19G009100 1.0kb upstream 1.0kb upstream 4815 true Chr19: 865583-870397 Glycine max
Glyma.19G009100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 865583-866582 Glycine max
Glyma.19G009100 1.0kb downstream 1.0kb downstream 4815 true Chr19: 866583-871397 Glycine max
Glyma.19G009100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 870398-871397 Glycine max
Glyma.19G009100 2.0kb upstream 2.0kb upstream 5815 true Chr19: 864583-870397 Glycine max
Glyma.19G009100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 864583-866582 Glycine max
Glyma.19G009100 2.0kb downstream 2.0kb downstream 5815 true Chr19: 866583-872397 Glycine max
Glyma.19G009100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 870398-872397 Glycine max
Glyma.19G009100 5.0kb upstream 5.0kb upstream 8815 true Chr19: 861583-870397 Glycine max
Glyma.19G009100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 861583-866582 Glycine max
Glyma.19G009100 5.0kb downstream 5.0kb downstream 8815 true Chr19: 866583-875397 Glycine max
Glyma.19G009100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 870398-875397 Glycine max
Glyma.19G009100 10.0kb upstream 10.0kb upstream 13815 true Chr19: 856583-870397 Glycine max
Glyma.19G009100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 856583-866582 Glycine max
Glyma.19G009100 10.0kb downstream 10.0kb downstream 13815 true Chr19: 866583-880397 Glycine max
Glyma.19G009100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 870398-880397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301196 5265 Fabidae View MSA
124064920 5270 Rosid View MSA
123745311 5271 Pentapetalae View MSA
122794907 5272 Eudicot View MSA
122048013 5273 Angiosperm View MSA
121347796 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.614 0.0 411.889 High  
cufflinks 12.3365 0.0 37.8002    
cufflinks 99.1712 0.0 389.873 High  
cufflinks 18.7593 0.0 59.58    
cufflinks 16.3587 0.0 56.4591    
cufflinks 22.8072 0.0 77.8417    
cufflinks 1035.82 0.0 24726.4 High High
cufflinks 9.29879 0.0 29.5825    
cufflinks 21.6397 0.0 64.3449 High  
cufflinks 1.796       Low
cufflinks 16.657     High High
cufflinks 13.907     High High
cufflinks 2.48       Low
cufflinks 2.344       Low
cufflinks 14.252     High High
cufflinks 7.807     High  
cufflinks 4.639        
cufflinks 2.578        
cufflinks 2.671        
cufflinks 10.507     High  
cufflinks 11.623     High  
cufflinks 5.238        
cufflinks 1.572       Low
cufflinks 19.722     High High
cufflinks 9.708     High  
cufflinks 7.556     High  

0 Strain