Gene : Glyma.02G100900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12111:SF2 - COILED-COIL DOMAIN-CONTAINING PROTEIN 130 Genomic Order:  1009
Name:  ? Glyma.02G100900 Secondary Identifier:  ? PAC:30507472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G100900 0.5kb upstream 0.5kb upstream 3819 true Chr02: 9518687-9522505 Glycine max
Glyma.02G100900 0.5kb upstream 0.5kb upstream 500 false Chr02: 9518687-9519186 Glycine max
Glyma.02G100900 0.5kb downstream 0.5kb downstream 3819 true Chr02: 9519187-9523005 Glycine max
Glyma.02G100900 0.5kb downstream 0.5kb downstream 500 false Chr02: 9522506-9523005 Glycine max
Glyma.02G100900 1.0kb upstream 1.0kb upstream 4319 true Chr02: 9518187-9522505 Glycine max
Glyma.02G100900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9518187-9519186 Glycine max
Glyma.02G100900 1.0kb downstream 1.0kb downstream 4319 true Chr02: 9519187-9523505 Glycine max
Glyma.02G100900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9522506-9523505 Glycine max
Glyma.02G100900 2.0kb upstream 2.0kb upstream 5319 true Chr02: 9517187-9522505 Glycine max
Glyma.02G100900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9517187-9519186 Glycine max
Glyma.02G100900 2.0kb downstream 2.0kb downstream 5319 true Chr02: 9519187-9524505 Glycine max
Glyma.02G100900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9522506-9524505 Glycine max
Glyma.02G100900 5.0kb upstream 5.0kb upstream 8319 true Chr02: 9514187-9522505 Glycine max
Glyma.02G100900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9514187-9519186 Glycine max
Glyma.02G100900 5.0kb downstream 5.0kb downstream 8319 true Chr02: 9519187-9527505 Glycine max
Glyma.02G100900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9522506-9527505 Glycine max
Glyma.02G100900 10.0kb upstream 10.0kb upstream 13319 true Chr02: 9509187-9522505 Glycine max
Glyma.02G100900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9509187-9519186 Glycine max
Glyma.02G100900 10.0kb downstream 10.0kb downstream 13319 true Chr02: 9519187-9532505 Glycine max
Glyma.02G100900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9522506-9532505 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308878 5265 Fabidae View MSA
124066479 5270 Rosid View MSA
123741019 5271 Pentapetalae View MSA
122788586 5272 Eudicot View MSA
122043974 5273 Angiosperm View MSA
121347159 5274 Embryophyte View MSA
123428869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1409 0.0 64.4227 High  
cufflinks 18.6722 0.0 49.8923    
cufflinks 32.0857 0.0 86.2949 High High
cufflinks 19.1632 0.0 51.1676    
cufflinks 13.5227 0.0 36.5553   Low
cufflinks 33.0439 0.0 88.8437 High High
cufflinks 14.7558 0.0 39.7295   Low
cufflinks 26.3026 0.0 70.2947 High  
cufflinks 17.2349 0.0 46.1374    
cufflinks 7.787     High  
cufflinks 16.482     High High
cufflinks 10.563     High  
cufflinks 6.666       Low
cufflinks 5.391       Low
cufflinks 9.833     High  
cufflinks 10.083     High  
cufflinks 9.879     High  
cufflinks 8.887     High  
cufflinks 8.807     High  
cufflinks 9.107     High  
cufflinks 15.257     High High
cufflinks 9.628     High  
cufflinks 7.65     High  
cufflinks 17.568     High High
cufflinks 9.489     High  
cufflinks 15.218     High High

0 Strain