Gene : Glyma.02G103500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10509//PTHR10509:SF23 - O-METHYLTRANSFERASE-RELATED Genomic Order:  1035
Name:  ? Glyma.02G103500 Secondary Identifier:  ? PAC:30508573
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-361 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G103500 0.5kb upstream 0.5kb upstream 2534 true Chr02: 9836181-9838714 Glycine max
Glyma.02G103500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9836181-9836680 Glycine max
Glyma.02G103500 0.5kb downstream 0.5kb downstream 2534 true Chr02: 9836681-9839214 Glycine max
Glyma.02G103500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9838715-9839214 Glycine max
Glyma.02G103500 1.0kb upstream 1.0kb upstream 3034 true Chr02: 9835681-9838714 Glycine max
Glyma.02G103500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9835681-9836680 Glycine max
Glyma.02G103500 1.0kb downstream 1.0kb downstream 3034 true Chr02: 9836681-9839714 Glycine max
Glyma.02G103500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9838715-9839714 Glycine max
Glyma.02G103500 2.0kb upstream 2.0kb upstream 4034 true Chr02: 9834681-9838714 Glycine max
Glyma.02G103500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9834681-9836680 Glycine max
Glyma.02G103500 2.0kb downstream 2.0kb downstream 4034 true Chr02: 9836681-9840714 Glycine max
Glyma.02G103500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9838715-9840714 Glycine max
Glyma.02G103500 5.0kb upstream 5.0kb upstream 7034 true Chr02: 9831681-9838714 Glycine max
Glyma.02G103500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9831681-9836680 Glycine max
Glyma.02G103500 5.0kb downstream 5.0kb downstream 7034 true Chr02: 9836681-9843714 Glycine max
Glyma.02G103500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9838715-9843714 Glycine max
Glyma.02G103500 10.0kb upstream 10.0kb upstream 12034 true Chr02: 9826681-9838714 Glycine max
Glyma.02G103500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9826681-9836680 Glycine max
Glyma.02G103500 10.0kb downstream 10.0kb downstream 12034 true Chr02: 9836681-9848714 Glycine max
Glyma.02G103500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9838715-9848714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303546 5265 Fabidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.0052 0.0 358.175 High  
cufflinks 92.0992 0.0 370.515 High  
cufflinks 85.6913 0.0 337.225 High  
cufflinks 174.884 0.0 762.074 High  
cufflinks 51.2338 0.0 181.266 High  
cufflinks 142.837 0.0 570.286 High  
cufflinks 14.2789 0.0 44.0716   Low
cufflinks 258.817 0.0 1407.74 High High
cufflinks 73.6607 0.0 279.637 High  
cufflinks 63.297     High High
cufflinks 4.472       Low
cufflinks 37.267     High  
cufflinks 30.515     High  
cufflinks 4.633       Low
cufflinks 3.091       Low
cufflinks 21.625     High  
cufflinks 29.107     High  
cufflinks 30.071     High  
cufflinks 50.502     High High
cufflinks 13.412     High  
cufflinks 7.762     High  
cufflinks 26.577     High  
cufflinks 27.649     High  
cufflinks 8.75     High  
cufflinks 16.879     High  
cufflinks 16.048     High  

0 Strain