Gene : Glyma.02G108700 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF574 - CALCIUM-BINDING PROTEIN CML30-RELATED Genomic Order:  1087
Name:  ? Glyma.02G108700 Secondary Identifier:  ? PAC:30506641
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G108700 0.5kb upstream 0.5kb upstream 1311 true Chr02: 10403564-10404874 Glycine max
Glyma.02G108700 0.5kb upstream 0.5kb upstream 500 false Chr02: 10403564-10404063 Glycine max
Glyma.02G108700 0.5kb downstream 0.5kb downstream 1311 true Chr02: 10404064-10405374 Glycine max
Glyma.02G108700 0.5kb downstream 0.5kb downstream 500 false Chr02: 10404875-10405374 Glycine max
Glyma.02G108700 1.0kb upstream 1.0kb upstream 1811 true Chr02: 10403064-10404874 Glycine max
Glyma.02G108700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10403064-10404063 Glycine max
Glyma.02G108700 1.0kb downstream 1.0kb downstream 1811 true Chr02: 10404064-10405874 Glycine max
Glyma.02G108700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10404875-10405874 Glycine max
Glyma.02G108700 2.0kb upstream 2.0kb upstream 2811 true Chr02: 10402064-10404874 Glycine max
Glyma.02G108700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10402064-10404063 Glycine max
Glyma.02G108700 2.0kb downstream 2.0kb downstream 2811 true Chr02: 10404064-10406874 Glycine max
Glyma.02G108700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10404875-10406874 Glycine max
Glyma.02G108700 5.0kb upstream 5.0kb upstream 5811 true Chr02: 10399064-10404874 Glycine max
Glyma.02G108700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10399064-10404063 Glycine max
Glyma.02G108700 5.0kb downstream 5.0kb downstream 5811 true Chr02: 10404064-10409874 Glycine max
Glyma.02G108700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10404875-10409874 Glycine max
Glyma.02G108700 10.0kb upstream 10.0kb upstream 10811 true Chr02: 10394064-10404874 Glycine max
Glyma.02G108700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10394064-10404063 Glycine max
Glyma.02G108700 10.0kb downstream 10.0kb downstream 10811 true Chr02: 10404064-10414874 Glycine max
Glyma.02G108700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10404875-10414874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241988 5265 Fabidae Singleton cluster - no MSA
124072799 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.04303 0.0 10.6939   High
cufflinks 0.0328121 0.0 0.148804 Low Low
cufflinks 0.670642 0.0 2.55616    
cufflinks 0.490623 0.0 1.89933    
cufflinks 0.149173 0.0 0.605995 Low  
cufflinks 1.60369 0.0 5.88378    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.366578 0.0 1.43604    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.582       High
cufflinks 0.26        
cufflinks 0.513        
cufflinks 0.407        
cufflinks 0.134        
cufflinks 0.046     Low Low
cufflinks 0.117        
cufflinks 0.452        
cufflinks 0.353        
cufflinks 0.556        
cufflinks 0.156        
cufflinks 0.082       Low
cufflinks 0.695        
cufflinks 1.636       High
cufflinks 0.702        
cufflinks 0.178        
cufflinks 0.242        

0 Strain